Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm15692-201ENSMUST00000152173 352 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm16129-201ENSMUST00000152628 486 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm21737-201ENSMUST00000178112 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm21729-201ENSMUST00000180058 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm21853-201ENSMUST00000180071 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm20901-201ENSMUST00000180177 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm29073-201ENSMUST00000185563 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm29495-201ENSMUST00000189319 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm28090-201ENSMUST00000189458 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm21647-201ENSMUST00000189755 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm29165-201ENSMUST00000190655 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm29211-201ENSMUST00000191470 664 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Gm36891-201ENSMUST00000191995 655 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Scn11aQ9R053 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.08□□□□□ -2.24
Scn11aQ9R053 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Scn11aQ9R053 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.07□□□□□ -2.24
Scn11aQ9R053 Gm23994-201ENSMUST00000158059 88 ntBASIC1.07□□□□□ -2.24
Scn11aQ9R053 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.07□□□□□ -2.24
Scn11aQ9R053 Gm13602-201ENSMUST00000122405 493 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm27587-201ENSMUST00000185116 163 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Scn11aQ9R053 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm12646-201ENSMUST00000119144 238 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm14591-201ENSMUST00000120407 518 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm21139-201ENSMUST00000186594 877 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Gm29192-201ENSMUST00000190942 377 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Ear14-201ENSMUST00000049559 468 ntBASIC1.06□□□□□ -2.24
Scn11aQ9R053 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Scn11aQ9R053 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Scn11aQ9R053 Mir223-201ENSMUST00000102112 110 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 Gm12393-201ENSMUST00000117084 848 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Scn11aQ9R053 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.05□□□□□ -2.24
Scn11aQ9R053 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC1.04□□□□□ -2.24
Scn11aQ9R053 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.04□□□□□ -2.24
Scn11aQ9R053 Gm42796-201ENSMUST00000199913 1087 ntBASIC1.04□□□□□ -2.24
Scn11aQ9R053 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC1.04□□□□□ -2.24
Scn11aQ9R053 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.04□□□□□ -2.24
Scn11aQ9R053 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Scn11aQ9R053 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm11572-201ENSMUST00000119164 120 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm27980-201ENSMUST00000184094 169 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm42623-201ENSMUST00000197225 379 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm34701-202ENSMUST00000204685 360 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm38044-201ENSMUST00000192964 487 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Gm45616-201ENSMUST00000211711 319 ntBASIC1.03□□□□□ -2.24
Scn11aQ9R053 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Scn11aQ9R053 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.02□□□□□ -2.25
Scn11aQ9R053 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Scn11aQ9R053 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Scn11aQ9R053 Gm29754-201ENSMUST00000206269 358 ntBASIC1.02□□□□□ -2.25
Scn11aQ9R053 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.02□□□□□ -2.25
Scn11aQ9R053 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
Scn11aQ9R053 Gm6954-201ENSMUST00000117416 225 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm26435-201ENSMUST00000179026 107 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm25079-201ENSMUST00000082529 203 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm11898-201ENSMUST00000117161 385 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm14073-201ENSMUST00000117344 381 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm24768-201ENSMUST00000158512 94 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm9071-201ENSMUST00000165915 474 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm37997-201ENSMUST00000193515 267 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm33354-201ENSMUST00000195448 906 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.01□□□□□ -2.25
Scn11aQ9R053 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.01□□□□□ -2.25
Scn11aQ9R053 Gm14678-201ENSMUST00000121396 482 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 Gm24476-201ENSMUST00000157437 131 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 Gm22447-201ENSMUST00000158155 92 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Scn11aQ9R053 Gm26285-201ENSMUST00000177923 107 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC1□□□□□ -2.25
Scn11aQ9R053 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 Gm23622-201ENSMUST00000082460 107 ntBASIC1□□□□□ -2.25
Scn11aQ9R053 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC0.99□□□□□ -2.25
Scn11aQ9R053 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC0.99□□□□□ -2.25
Scn11aQ9R053 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC0.99□□□□□ -2.25
Scn11aQ9R053 Gm27977-201ENSMUST00000185159 111 ntBASIC0.99□□□□□ -2.25
Scn11aQ9R053 AL662807.1-201ENSMUST00000224183 126 ntBASIC0.99□□□□□ -2.25
Scn11aQ9R053 Mir101a-201ENSMUST00000083517 83 ntBASIC0.99□□□□□ -2.25
Scn11aQ9R053 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.99□□□□□ -2.25
Scn11aQ9R053 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC0.98□□□□□ -2.25
Scn11aQ9R053 Gm34015-201ENSMUST00000194908 451 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms