Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm24282-201ENSMUST00000104232 66 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm14500-201ENSMUST00000121647 113 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Mir1942-201ENSMUST00000157274 63 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm25716-201ENSMUST00000158628 104 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm22531-201ENSMUST00000158819 140 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm9687-201ENSMUST00000189312 602 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm44474-201ENSMUST00000196525 127 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm43746-201ENSMUST00000200028 317 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm8820-201ENSMUST00000204077 571 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm6240-201ENSMUST00000208014 473 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm45553-201ENSMUST00000209929 507 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm22620-201ENSMUST00000082700 133 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Mir384-201ENSMUST00000083565 88 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm23875-201ENSMUST00000083711 318 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.13□□□□□ -1.75
Trim39Q9ESN2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Trim39Q9ESN2 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm24263-201ENSMUST00000104059 107 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm26275-201ENSMUST00000157101 268 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm24015-201ENSMUST00000157725 232 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm26034-201ENSMUST00000158154 116 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm24726-201ENSMUST00000158232 121 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm27733-201ENSMUST00000184803 68 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm37923-201ENSMUST00000191624 161 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm43649-201ENSMUST00000196596 391 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm45317-201ENSMUST00000210385 223 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm24356-201ENSMUST00000082859 106 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm23239-201ENSMUST00000083006 181 ntBASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim39Q9ESN2 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm23594-201ENSMUST00000104307 134 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Mir1b-201ENSMUST00000117012 122 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm12071-201ENSMUST00000121968 469 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm43220-201ENSMUST00000199299 282 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm45013-201ENSMUST00000206883 178 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm18991-201ENSMUST00000209225 746 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Gm26449-201ENSMUST00000082452 104 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Mir28a-201ENSMUST00000083560 86 ntBASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Trim39Q9ESN2 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm14073-201ENSMUST00000117344 381 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm20674-201ENSMUST00000177452 369 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm25935-201ENSMUST00000178746 107 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm27220-201ENSMUST00000183453 262 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm29574-201ENSMUST00000186226 696 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Mir721-201ENSMUST00000200230 88 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 142.3 ms