Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Mir105-201ENSMUST00000104655 80 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm9157-201ENSMUST00000117673 225 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm12647-201ENSMUST00000118977 265 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm13692-201ENSMUST00000120774 371 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm23704-201ENSMUST00000158844 340 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Mir3058-201ENSMUST00000175126 91 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm28358-202ENSMUST00000189292 223 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm2719-201ENSMUST00000191929 444 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Trbv7-201ENSMUST00000193339 402 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm37801-201ENSMUST00000194754 274 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm42621-201ENSMUST00000198114 275 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm45365-201ENSMUST00000209489 256 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm45380-201ENSMUST00000210465 315 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm4945-201ENSMUST00000075152 453 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm23055-201ENSMUST00000082805 94 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Rny1-201ENSMUST00000083767 112 ntBASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Upf1Q9EPU0 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm23746-201ENSMUST00000104229 125 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm14296-202ENSMUST00000108931 750 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm14581-201ENSMUST00000121726 198 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm24681-201ENSMUST00000158760 107 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm23198-201ENSMUST00000158811 91 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm25162-201ENSMUST00000158906 159 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm44594-201ENSMUST00000208982 407 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Upf1Q9EPU0 AC124537.1-201ENSMUST00000222890 159 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm23041-201ENSMUST00000083868 106 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Gm45557-201ENSMUST00000210004 1651 ntBASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.38□□□□□ -1.71
Upf1Q9EPU0 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm14119-201ENSMUST00000119511 235 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm22113-201ENSMUST00000158343 104 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm24675-201ENSMUST00000158757 259 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm27532-201ENSMUST00000183726 113 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm28118-201ENSMUST00000185957 294 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm43155-201ENSMUST00000202661 494 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm44157-201ENSMUST00000204720 410 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm8940-201ENSMUST00000212585 219 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Mir30e-201ENSMUST00000083475 92 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Gm26329-201ENSMUST00000093723 110 ntBASIC4.37□□□□□ -1.71
Upf1Q9EPU0 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm23142-201ENSMUST00000101848 105 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm26240-201ENSMUST00000101893 105 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm13880-201ENSMUST00000118421 474 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm13155-201ENSMUST00000119277 646 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm14551-201ENSMUST00000120802 256 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm8178-201ENSMUST00000121570 646 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm23956-201ENSMUST00000157211 119 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm25220-201ENSMUST00000157546 95 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm26215-201ENSMUST00000158584 139 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm27903-201ENSMUST00000175482 126 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm28920-201ENSMUST00000189957 699 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm18306-201ENSMUST00000207338 569 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm23451-201ENSMUST00000083328 122 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Gm10222-201ENSMUST00000088336 294 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Upf1Q9EPU0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm22958-201ENSMUST00000122512 184 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm24501-201ENSMUST00000158452 62 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm27374-201ENSMUST00000183660 81 ntBASIC4.35□□□□□ -1.71
Upf1Q9EPU0 Gm44519-201ENSMUST00000206486 122 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms