Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm24313-201ENSMUST00000082561 133 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm5670-201ENSMUST00000093546 372 ntBASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Cdc40Q9DC48 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm26377-201ENSMUST00000102184 108 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm26256-201ENSMUST00000122499 186 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm23118-201ENSMUST00000122657 187 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm2020-201ENSMUST00000145242 579 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm26280-201ENSMUST00000157096 101 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm25910-201ENSMUST00000157620 140 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm24900-201ENSMUST00000158128 134 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm2930-201ENSMUST00000170403 474 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm28283-201ENSMUST00000185509 178 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm28627-201ENSMUST00000186141 453 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm38044-201ENSMUST00000192964 487 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm42805-201ENSMUST00000196158 276 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm43550-201ENSMUST00000200597 303 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm44459-201ENSMUST00000203926 160 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm18160-201ENSMUST00000214279 827 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm46389-201ENSMUST00000223199 392 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm22806-201ENSMUST00000082738 136 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm24044-201ENSMUST00000083107 156 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm23503-201ENSMUST00000083903 107 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.06□□□□□ -2.08
Cdc40Q9DC48 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm12814-201ENSMUST00000117091 846 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm14932-201ENSMUST00000117112 453 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm14943-201ENSMUST00000118056 546 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm15312-201ENSMUST00000118827 271 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm15309-201ENSMUST00000121644 240 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm25961-201ENSMUST00000157174 135 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm26622-201ENSMUST00000180520 298 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Mir7667-201ENSMUST00000183866 63 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm28399-201ENSMUST00000186221 318 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm28572-201ENSMUST00000187444 318 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm37557-201ENSMUST00000191640 139 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm37455-201ENSMUST00000191993 529 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm43804-201ENSMUST00000198280 456 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm43114-201ENSMUST00000198298 343 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm44320-201ENSMUST00000199276 86 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.05□□□□□ -2.08
Cdc40Q9DC48 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.05□□□□□ -2.08
Cdc40Q9DC48 Gm13059-201ENSMUST00000119881 398 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm14588-201ENSMUST00000119895 172 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm13433-201ENSMUST00000121701 240 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm14629-201ENSMUST00000122428 144 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm16510-201ENSMUST00000153501 249 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm22083-201ENSMUST00000157586 102 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm22611-201ENSMUST00000158288 150 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm23548-201ENSMUST00000158963 106 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm16326-201ENSMUST00000162843 414 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Mir6997-201ENSMUST00000184313 71 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Mir8090-201ENSMUST00000185078 136 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm37029-201ENSMUST00000195773 239 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Cdc40Q9DC48 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm24661-201ENSMUST00000083205 104 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm22974-201ENSMUST00000083301 103 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Mir322-201ENSMUST00000083484 95 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Mir222-201ENSMUST00000083537 79 ntBASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Cdc40Q9DC48 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cdc40Q9DC48 Gm22091-201ENSMUST00000116908 127 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms