Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.79□□□□□ -2.12
Lsm1Q8VC85 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Lsm1Q8VC85 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Lsm1Q8VC85 Gm25213-201ENSMUST00000102388 113 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm12191-201ENSMUST00000118307 348 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm24358-201ENSMUST00000158424 288 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm24656-201ENSMUST00000177548 132 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm28000-201ENSMUST00000184380 85 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm28163-201ENSMUST00000187099 325 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm43582-201ENSMUST00000196149 343 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm45252-201ENSMUST00000211579 397 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm22443-201ENSMUST00000082890 107 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm25257-201ENSMUST00000083907 110 ntBASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Lsm1Q8VC85 Gm15110-201ENSMUST00000117545 881 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm15112-201ENSMUST00000120152 860 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm22603-201ENSMUST00000157603 96 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm21744-201ENSMUST00000178403 662 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm21171-201ENSMUST00000180048 673 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm29413-201ENSMUST00000186019 880 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm28700-201ENSMUST00000187614 579 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm29639-201ENSMUST00000188375 580 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm28843-201ENSMUST00000189198 678 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm20776-201ENSMUST00000189940 700 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm29546-201ENSMUST00000191171 678 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm37550-201ENSMUST00000193230 463 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm44656-201ENSMUST00000208428 490 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm45439-201ENSMUST00000211723 359 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm24412-201ENSMUST00000083426 109 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Gm26327-201ENSMUST00000093724 111 ntBASIC1.77□□□□□ -2.13
Lsm1Q8VC85 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm11065-201ENSMUST00000111462 228 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm23551-201ENSMUST00000116852 121 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm14774-201ENSMUST00000117857 536 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm11219-201ENSMUST00000118565 358 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm14899-201ENSMUST00000118673 548 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm16053-201ENSMUST00000120511 188 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm12607-201ENSMUST00000120724 493 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm15279-201ENSMUST00000155593 288 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm25051-201ENSMUST00000158602 249 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm17062-201ENSMUST00000166987 461 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm4468-201ENSMUST00000170206 294 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Mir6379-201ENSMUST00000183392 115 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Mir7241-201ENSMUST00000184532 64 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm45912-201ENSMUST00000210646 543 ntBASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.76□□□□□ -2.13
Lsm1Q8VC85 Gm12765-201ENSMUST00000117273 615 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm14292-201ENSMUST00000118761 456 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm22891-201ENSMUST00000158641 164 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm22527-201ENSMUST00000158816 106 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm17085-201ENSMUST00000165425 502 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm22192-201ENSMUST00000175128 85 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm28058-201ENSMUST00000186421 264 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm29600-201ENSMUST00000188687 377 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm37778-201ENSMUST00000191732 190 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Mir7021-201ENSMUST00000197026 63 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm44050-201ENSMUST00000204263 527 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Gm25632-201ENSMUST00000083112 85 ntBASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Lsm1Q8VC85 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Gm26077-201ENSMUST00000104064 123 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Gm26342-201ENSMUST00000104557 129 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Gm12550-201ENSMUST00000118478 329 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Gm12825-201ENSMUST00000120249 563 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.74□□□□□ -2.13
Lsm1Q8VC85 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms