Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm22034-201ENSMUST00000157283 134 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm24061-201ENSMUST00000157489 120 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm27592-201ENSMUST00000157729 126 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm22174-201ENSMUST00000175050 125 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm22692-201ENSMUST00000175055 125 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm27634-201ENSMUST00000175060 126 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm22460-201ENSMUST00000175269 124 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm24365-201ENSMUST00000175384 125 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm44310-201ENSMUST00000175424 126 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm22639-201ENSMUST00000175591 125 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm24979-201ENSMUST00000178626 126 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm27245-201ENSMUST00000184385 376 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm27743-201ENSMUST00000185136 126 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm43355-201ENSMUST00000196541 346 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm43217-201ENSMUST00000199513 367 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm2829-201ENSMUST00000213121 499 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm30674-201ENSMUST00000214523 392 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm2710-201ENSMUST00000073196 603 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ushbp1Q8R370 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.89□□□□□ -1.79
Ushbp1Q8R370 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm15936-201ENSMUST00000118706 460 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm13518-201ENSMUST00000120018 233 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm16358-201ENSMUST00000146046 210 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm26088-201ENSMUST00000157896 131 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm22516-201ENSMUST00000158266 124 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm43955-201ENSMUST00000204332 142 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm44055-201ENSMUST00000204376 247 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm45704-201ENSMUST00000212582 403 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm26164-201ENSMUST00000083793 104 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm25630-201ENSMUST00000084000 162 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ushbp1Q8R370 Snord98-201ENSMUST00000116819 65 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm13122-201ENSMUST00000118380 453 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm12722-201ENSMUST00000118507 493 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm15223-201ENSMUST00000120989 826 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm12858-201ENSMUST00000121913 208 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm22957-201ENSMUST00000122511 123 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm25391-201ENSMUST00000157342 134 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm22843-201ENSMUST00000157710 134 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm20450-201ENSMUST00000173652 147 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm24264-201ENSMUST00000179835 94 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm18384-201ENSMUST00000195974 808 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm44320-201ENSMUST00000199276 86 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm44825-201ENSMUST00000207557 150 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm44598-201ENSMUST00000207566 150 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm45119-201ENSMUST00000207612 199 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Gm25207-201ENSMUST00000093745 107 ntBASIC3.87□□□□□ -1.79
Ushbp1Q8R370 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms