Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm43865-201ENSMUST00000204721 127 ntBASIC1.47□□□□□ -2.17
Col16a1Q8BLX7 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Col16a1Q8BLX7 Mir137-201ENSMUST00000083635 73 ntBASIC1.47□□□□□ -2.17
Col16a1Q8BLX7 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
Col16a1Q8BLX7 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
Col16a1Q8BLX7 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.46□□□□□ -2.18
Col16a1Q8BLX7 Mir873a-201ENSMUST00000104863 77 ntBASIC1.46□□□□□ -2.18
Col16a1Q8BLX7 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.46□□□□□ -2.18
Col16a1Q8BLX7 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
Col16a1Q8BLX7 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.46□□□□□ -2.18
Col16a1Q8BLX7 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Gm24060-201ENSMUST00000157494 95 ntBASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Gm19649-201ENSMUST00000201126 822 ntBASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Gm44058-201ENSMUST00000204335 467 ntBASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Col16a1Q8BLX7 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm23126-201ENSMUST00000104260 134 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm23708-201ENSMUST00000104367 123 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm15215-201ENSMUST00000117773 489 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm25625-201ENSMUST00000157221 96 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm27419-201ENSMUST00000184576 109 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 AC158392.1-201ENSMUST00000223720 1069 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Snord14a-201ENSMUST00000082807 87 ntBASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Col16a1Q8BLX7 Gm25185-201ENSMUST00000157754 96 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm24222-201ENSMUST00000158834 93 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm5277-201ENSMUST00000164923 556 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Mir3066-201ENSMUST00000175296 83 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm21809-201ENSMUST00000178495 468 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm44462-201ENSMUST00000199696 129 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm8041-201ENSMUST00000199755 616 ntBASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Col16a1Q8BLX7 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm24551-201ENSMUST00000158645 92 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm43978-201ENSMUST00000203491 451 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm29809-201ENSMUST00000218423 493 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 AC154562.1-201ENSMUST00000226140 966 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm24865-201ENSMUST00000103246 96 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm25332-201ENSMUST00000158038 105 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm25996-201ENSMUST00000175393 117 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm43407-201ENSMUST00000199816 317 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm44052-201ENSMUST00000203382 396 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.42□□□□□ -2.18
Col16a1Q8BLX7 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm22389-201ENSMUST00000158193 301 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm17204-201ENSMUST00000167936 478 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm27722-201ENSMUST00000183908 76 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm20811-201ENSMUST00000190500 553 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Gm44830-201ENSMUST00000207667 584 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col16a1Q8BLX7 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.4□□□□□ -2.18
Col16a1Q8BLX7 Gm15692-201ENSMUST00000152173 352 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Gm25166-201ENSMUST00000158909 111 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Gm25312-201ENSMUST00000178972 107 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Gm18414-201ENSMUST00000210858 694 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Gm45701-201ENSMUST00000212049 235 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
Col16a1Q8BLX7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Gm22270-201ENSMUST00000104034 132 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Gm4910-201ENSMUST00000119605 366 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Gm16373-201ENSMUST00000129517 303 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Gm25961-201ENSMUST00000157174 135 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Gm8207-201ENSMUST00000171204 502 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Snora24-201ENSMUST00000174989 130 ntBASIC1.39□□□□□ -2.19
Col16a1Q8BLX7 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms