Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Best3Q6H1V1 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Best3Q6H1V1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm14973-201ENSMUST00000117248 255 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm11935-201ENSMUST00000118608 399 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm15244-201ENSMUST00000121122 130 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm23755-201ENSMUST00000157578 343 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm16289-201ENSMUST00000162079 183 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm26585-201ENSMUST00000180890 630 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm37361-201ENSMUST00000194345 132 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm44655-201ENSMUST00000207768 423 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm23517-201ENSMUST00000082830 192 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Mir208a-201ENSMUST00000083498 83 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.45□□□□□ -1.7
Best3Q6H1V1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Best3Q6H1V1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm22779-201ENSMUST00000104085 107 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm13439-201ENSMUST00000117541 409 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm13692-201ENSMUST00000120774 371 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm23581-201ENSMUST00000158531 63 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm24976-201ENSMUST00000158972 135 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm23921-201ENSMUST00000175258 107 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm28920-201ENSMUST00000189957 699 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm38238-201ENSMUST00000194334 346 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm43286-201ENSMUST00000197420 424 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm44266-201ENSMUST00000205235 500 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 AC167140.1-201ENSMUST00000224710 403 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm22970-201ENSMUST00000083304 186 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm25651-201ENSMUST00000083782 119 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Best3Q6H1V1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.44□□□□□ -1.7
Best3Q6H1V1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Best3Q6H1V1 Gm42755-201ENSMUST00000198533 1493 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm24172-201ENSMUST00000104127 117 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm23759-201ENSMUST00000158351 268 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm22766-201ENSMUST00000158372 99 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm24501-201ENSMUST00000158452 62 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm24005-201ENSMUST00000158459 296 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Gm25630-201ENSMUST00000084000 162 ntBASIC4.43□□□□□ -1.7
Best3Q6H1V1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Best3Q6H1V1 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Best3Q6H1V1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm9157-201ENSMUST00000117673 225 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm17065-201ENSMUST00000165245 239 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm19177-201ENSMUST00000204520 613 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.42□□□□□ -1.7
Best3Q6H1V1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Best3Q6H1V1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Best3Q6H1V1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms