Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm14387-201ENSMUST00000121827 2055 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim28Q62318 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm14792-201ENSMUST00000119725 258 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm7327-201ENSMUST00000120925 652 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm11582-201ENSMUST00000121041 236 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm22482-201ENSMUST00000122563 359 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim28Q62318 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.13□□□□□ -1.75
Trim28Q62318 Gm23901-201ENSMUST00000157570 107 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm24138-201ENSMUST00000157572 114 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm24666-201ENSMUST00000158937 167 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm20698-201ENSMUST00000175657 233 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim28Q62318 Gm28002-201ENSMUST00000184832 100 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm29365-201ENSMUST00000189461 699 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm43975-201ENSMUST00000203023 481 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm44336-201ENSMUST00000203696 468 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim28Q62318 Gm44609-201ENSMUST00000207157 460 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm45313-201ENSMUST00000210584 178 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 AC165157.3-201ENSMUST00000220815 103 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm26164-201ENSMUST00000083793 104 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.13□□□□□ -1.75
Trim28Q62318 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim28Q62318 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim28Q62318 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim28Q62318 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Trim28Q62318 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim28Q62318 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim28Q62318 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim28Q62318 Gm13046-201ENSMUST00000117391 501 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm14049-201ENSMUST00000121009 636 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim28Q62318 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.12□□□□□ -1.75
Trim28Q62318 Gm23391-201ENSMUST00000157579 104 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm25333-201ENSMUST00000158035 246 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm20660-201ENSMUST00000177515 289 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim28Q62318 Gm32033-201ENSMUST00000193483 339 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.12□□□□□ -1.75
Trim28Q62318 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.12□□□□□ -1.75
Trim28Q62318 Gm22293-201ENSMUST00000083314 109 ntBASIC4.12□□□□□ -1.75
Trim28Q62318 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Trim28Q62318 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Trim28Q62318 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Trim28Q62318 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim28Q62318 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Gm26387-201ENSMUST00000104238 132 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm25879-201ENSMUST00000104330 107 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm11598-201ENSMUST00000119257 357 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm25425-201ENSMUST00000157611 96 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm22381-201ENSMUST00000158186 107 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm24520-201ENSMUST00000179510 110 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm27580-201ENSMUST00000183666 149 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm18964-201ENSMUST00000193013 563 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Gm43393-201ENSMUST00000200147 194 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim28Q62318 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim28Q62318 Gm23615-201ENSMUST00000082602 65 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Gm22571-201ENSMUST00000082984 70 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Trim28Q62318 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.11□□□□□ -1.75
Trim28Q62318 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.11□□□□□ -1.75
Trim28Q62318 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim28Q62318 Gm13273-201ENSMUST00000119737 159 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim28Q62318 Gm24518-201ENSMUST00000180275 94 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Mir7k-201ENSMUST00000184115 110 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim28Q62318 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Gm44157-201ENSMUST00000204720 410 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Gm45005-201ENSMUST00000206640 157 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim28Q62318 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 AC151833.1-201ENSMUST00000227752 574 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim28Q62318 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim28Q62318 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.1□□□□□ -1.75
Trim28Q62318 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim28Q62318 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm14838-201ENSMUST00000118913 248 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm13419-201ENSMUST00000121711 271 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm15466-201ENSMUST00000122299 333 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms