Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm9498-201ENSMUST00000140849 291 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm14368-201ENSMUST00000145305 415 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm24478-201ENSMUST00000157439 158 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm24716-201ENSMUST00000157524 104 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm22011-201ENSMUST00000158790 123 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm6395-201ENSMUST00000167639 691 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Mir7667-201ENSMUST00000183866 63 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Mir6997-201ENSMUST00000184313 71 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm37743-201ENSMUST00000194645 376 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm37993-201ENSMUST00000195301 988 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm18453-201ENSMUST00000208000 626 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm8940-201ENSMUST00000212585 219 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm22061-201ENSMUST00000082557 107 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Gm25220-201ENSMUST00000157546 95 ntBASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Gm28163-201ENSMUST00000187099 325 ntBASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Gm44181-201ENSMUST00000203106 483 ntBASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Upf3bQ3ULL6 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Upf3bQ3ULL6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Upf3bQ3ULL6 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.03□□□□□ -2.09
Upf3bQ3ULL6 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Upf3bQ3ULL6 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm12814-201ENSMUST00000117091 846 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm13728-201ENSMUST00000117471 400 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm2768-201ENSMUST00000121062 250 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm11438-201ENSMUST00000121582 189 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm24770-201ENSMUST00000158505 92 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm22891-201ENSMUST00000158641 164 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm3102-201ENSMUST00000164236 489 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm19891-201ENSMUST00000189771 303 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm38044-201ENSMUST00000192964 487 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm44459-201ENSMUST00000203926 160 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Gm44961-201ENSMUST00000207450 196 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Upf3bQ3ULL6 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm12934-201ENSMUST00000119221 343 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm15177-201ENSMUST00000120491 577 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm13602-201ENSMUST00000122405 493 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm22382-201ENSMUST00000158185 130 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm17161-201ENSMUST00000169187 524 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Mir6950-201ENSMUST00000184438 73 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm43402-201ENSMUST00000197159 159 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm44050-201ENSMUST00000204263 527 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm44554-201ENSMUST00000208738 147 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm46136-201ENSMUST00000214730 565 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm26437-201ENSMUST00000082595 105 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm22974-201ENSMUST00000083301 103 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm16261-201ENSMUST00000096813 205 ntBASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Upf3bQ3ULL6 Gm43473-201ENSMUST00000200442 5997 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm22496-201ENSMUST00000104493 88 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Mir467h-201ENSMUST00000116759 121 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm13331-201ENSMUST00000117500 448 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm25335-201ENSMUST00000158043 103 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm22765-201ENSMUST00000158371 128 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm22664-201ENSMUST00000158719 105 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm25368-201ENSMUST00000158847 131 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm17164-201ENSMUST00000169013 506 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm25175-201ENSMUST00000178712 79 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Mir7226-201ENSMUST00000184953 60 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm28412-201ENSMUST00000187243 177 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm37455-201ENSMUST00000191993 529 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm37000-201ENSMUST00000193058 428 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm43708-201ENSMUST00000198857 961 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm43978-201ENSMUST00000203491 451 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm45636-201ENSMUST00000210497 1064 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2□□□□□ -2.09
Upf3bQ3ULL6 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2□□□□□ -2.09
Upf3bQ3ULL6 CT010480.1-201ENSMUST00000223612 363 ntBASIC2□□□□□ -2.09
Upf3bQ3ULL6 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC2□□□□□ -2.09
Upf3bQ3ULL6 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms