Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm11448-201ENSMUST00000120427 450 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm15167-201ENSMUST00000121997 187 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm16354-201ENSMUST00000155376 150 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm26102-201ENSMUST00000157251 284 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm25341-201ENSMUST00000157461 268 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm22435-201ENSMUST00000158552 128 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm24819-201ENSMUST00000175094 166 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Mir5624-201ENSMUST00000176635 61 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm24862-201ENSMUST00000179103 79 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm23310-201ENSMUST00000179105 79 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm25461-201ENSMUST00000179293 79 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm27245-201ENSMUST00000184385 376 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC163357.1-201ENSMUST00000220847 233 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm22061-201ENSMUST00000082557 107 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf180Q3U827 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm22496-201ENSMUST00000104493 88 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm13672-201ENSMUST00000117554 459 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm13153-201ENSMUST00000120969 637 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm22073-201ENSMUST00000122668 189 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm23000-201ENSMUST00000157083 139 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm22500-201ENSMUST00000158982 99 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm20698-201ENSMUST00000175657 233 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm25175-201ENSMUST00000178712 79 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm22951-201ENSMUST00000179471 107 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm27999-201ENSMUST00000183539 193 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm27624-201ENSMUST00000185047 177 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm44519-201ENSMUST00000206486 122 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gm44655-201ENSMUST00000207768 423 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.11□□□□□ -1.75
Rnf180Q3U827 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Rnf180Q3U827 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Rnf180Q3U827 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.11□□□□□ -1.75
Rnf180Q3U827 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Rnf180Q3U827 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnf180Q3U827 Defb44-ps-201ENSMUST00000126871 219 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm24552-201ENSMUST00000158646 103 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm22668-201ENSMUST00000158716 260 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm8207-201ENSMUST00000171204 502 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm20450-201ENSMUST00000173652 147 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm32033-201ENSMUST00000193483 339 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm19726-201ENSMUST00000205008 240 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm25801-201ENSMUST00000082638 106 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Gm26164-201ENSMUST00000083793 104 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.1□□□□□ -1.75
Rnf180Q3U827 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Rnf180Q3U827 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Rnf180Q3U827 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnf180Q3U827 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm23063-201ENSMUST00000102350 93 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm15844-201ENSMUST00000118016 576 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm14581-201ENSMUST00000121726 198 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Mir3470b-201ENSMUST00000175563 126 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm44055-201ENSMUST00000204376 247 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.09□□□□□ -1.75
Rnf180Q3U827 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf180Q3U827 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.09□□□□□ -1.76
Rnf180Q3U827 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Rnf180Q3U827 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnf180Q3U827 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Rnf180Q3U827 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf180Q3U827 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf180Q3U827 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf180Q3U827 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms