Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm23609-201ENSMUST00000104542 127 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Snord72-201ENSMUST00000104549 81 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm15844-201ENSMUST00000118016 576 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm26278-201ENSMUST00000157098 132 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm23545-201ENSMUST00000158205 104 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm25939-201ENSMUST00000179876 191 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm28148-201ENSMUST00000186924 697 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm43286-201ENSMUST00000197420 424 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Snora23-201ENSMUST00000082517 184 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm24533-201ENSMUST00000083138 196 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col28a1Q2UY11 Gm381-201ENSMUST00000117443 2037 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm24890-201ENSMUST00000104389 102 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm13046-201ENSMUST00000117391 501 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm12025-201ENSMUST00000117768 144 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm26045-201ENSMUST00000157862 97 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm25519-201ENSMUST00000158392 127 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm22891-201ENSMUST00000158641 164 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Mir3106-201ENSMUST00000175401 82 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Snora15-201ENSMUST00000177461 131 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm23725-201ENSMUST00000177876 107 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm24863-201ENSMUST00000179499 107 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm28002-201ENSMUST00000184832 100 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm44720-201ENSMUST00000206076 260 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm44600-201ENSMUST00000208540 111 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm45313-201ENSMUST00000210584 178 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm22169-201ENSMUST00000083229 107 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.2□□□□□ -1.9
Col28a1Q2UY11 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Mir599-201ENSMUST00000102378 88 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm22936-201ENSMUST00000103955 126 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm23530-201ENSMUST00000104564 137 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm25560-201ENSMUST00000104606 176 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Snord98-201ENSMUST00000116819 65 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm12156-201ENSMUST00000119188 554 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm8580-201ENSMUST00000160295 464 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm26400-201ENSMUST00000175012 85 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm26189-201ENSMUST00000179879 107 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm29192-201ENSMUST00000190942 377 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm37128-201ENSMUST00000192599 232 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm38076-201ENSMUST00000193889 450 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm18433-202ENSMUST00000195682 196 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm37029-201ENSMUST00000195773 239 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm43217-201ENSMUST00000199513 367 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm44084-201ENSMUST00000203947 409 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm45005-201ENSMUST00000206640 157 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm44811-201ENSMUST00000209120 228 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm18602-201ENSMUST00000209794 851 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm9765-201ENSMUST00000043170 321 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm24045-201ENSMUST00000083113 98 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm26164-201ENSMUST00000083793 104 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.19□□□□□ -1.9
Col28a1Q2UY11 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms