Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22156-201ENSMUST00000158409 141 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm22840-201ENSMUST00000158444 136 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm24739-201ENSMUST00000158855 292 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm16326-201ENSMUST00000162843 414 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm17187-201ENSMUST00000164622 410 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm17020-201ENSMUST00000172274 274 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm37162-201ENSMUST00000191708 551 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a1Q04857 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm44533-201ENSMUST00000207782 268 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm45002-201ENSMUST00000208045 120 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 AC161054.1-201ENSMUST00000214319 184 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm25481-201ENSMUST00000083221 158 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a1Q04857 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a1Q04857 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm16032-201ENSMUST00000118534 168 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm13273-201ENSMUST00000119737 159 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm13868-201ENSMUST00000122411 294 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.41□□□□□ -1.7
Col6a1Q04857 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm24481-201ENSMUST00000157210 102 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm24008-201ENSMUST00000157733 138 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm4479-201ENSMUST00000178807 171 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm9402-201ENSMUST00000196849 388 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm43402-201ENSMUST00000197159 159 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm4644-201ENSMUST00000197587 400 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm44824-201ENSMUST00000207021 229 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm16419-201ENSMUST00000221057 625 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm9795-201ENSMUST00000062156 693 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col6a1Q04857 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.41□□□□□ -1.7
Col6a1Q04857 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.4□□□□□ -1.7
Col6a1Q04857 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
Col6a1Q04857 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.4□□□□□ -1.7
Col6a1Q04857 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.4□□□□□ -1.7
Col6a1Q04857 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col6a1Q04857 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.4□□□□□ -1.7
Col6a1Q04857 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm6265-201ENSMUST00000149263 231 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm26187-201ENSMUST00000157693 101 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm22337-201ENSMUST00000157721 132 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm26287-201ENSMUST00000158887 81 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm27851-201ENSMUST00000183529 63 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm27392-201ENSMUST00000185041 101 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm18956-201ENSMUST00000192857 480 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm43250-201ENSMUST00000196536 273 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm44960-201ENSMUST00000207403 141 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Gm35857-201ENSMUST00000212739 178 ntBASIC4.4□□□□□ -1.71
Col6a1Q04857 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col6a1Q04857 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a1Q04857 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.4□□□□□ -1.71
Col6a1Q04857 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col6a1Q04857 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.4□□□□□ -1.71
Col6a1Q04857 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a1Q04857 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col6a1Q04857 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm26019-201ENSMUST00000104407 119 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm25105-201ENSMUST00000122477 130 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm23277-201ENSMUST00000157914 136 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm24898-201ENSMUST00000158133 106 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm26171-201ENSMUST00000158422 131 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm24005-201ENSMUST00000158459 296 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm25834-201ENSMUST00000158916 101 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm22118-201ENSMUST00000175593 171 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.39□□□□□ -1.71
Col6a1Q04857 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Mir28a-201ENSMUST00000083560 86 ntBASIC4.39□□□□□ -1.71
Col6a1Q04857 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm24121-201ENSMUST00000102029 106 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm11432-201ENSMUST00000117334 231 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm22380-201ENSMUST00000157479 95 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm23752-201ENSMUST00000157584 115 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm2962-201ENSMUST00000159266 336 ntBASIC4.38□□□□□ -1.71
Col6a1Q04857 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms