Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col8a1Q00780 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm4736-201ENSMUST00000100870 380 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Snord19-201ENSMUST00000104609 76 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm12125-201ENSMUST00000117261 736 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm13581-201ENSMUST00000120675 278 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm11819-201ENSMUST00000122192 372 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm6265-201ENSMUST00000149263 231 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm25054-201ENSMUST00000157370 97 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm22384-201ENSMUST00000158187 104 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm25438-201ENSMUST00000158281 110 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm20526-201ENSMUST00000173416 158 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm25024-201ENSMUST00000179667 104 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm25473-201ENSMUST00000180191 107 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm27457-201ENSMUST00000184771 156 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm28500-201ENSMUST00000190286 151 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm37601-201ENSMUST00000194922 394 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm18429-201ENSMUST00000198707 421 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm36189-201ENSMUST00000204113 523 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm45245-201ENSMUST00000210082 376 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm17779-201ENSMUST00000213395 394 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.49□□□□□ -1.85
Col8a1Q00780 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.49□□□□□ -1.85
Col8a1Q00780 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Col8a1Q00780 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col8a1Q00780 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col8a1Q00780 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm22496-201ENSMUST00000104493 88 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm24132-201ENSMUST00000104745 91 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm11065-201ENSMUST00000111462 228 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm14770-201ENSMUST00000122197 312 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm23666-201ENSMUST00000158053 116 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm18520-201ENSMUST00000174783 658 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm25175-201ENSMUST00000178712 79 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm23571-201ENSMUST00000180073 127 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm29704-201ENSMUST00000196011 253 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm32381-201ENSMUST00000203192 476 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm6796-201ENSMUST00000211919 243 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm16419-201ENSMUST00000221057 625 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm23932-201ENSMUST00000082914 107 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Gm25481-201ENSMUST00000083221 158 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Mir32-201ENSMUST00000083610 70 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.48□□□□□ -1.85
Col8a1Q00780 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col8a1Q00780 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col8a1Q00780 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Col8a1Q00780 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm13268-201ENSMUST00000117485 433 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm15268-201ENSMUST00000118845 352 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm6829-201ENSMUST00000119858 360 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm25637-201ENSMUST00000157529 107 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm26195-201ENSMUST00000175035 101 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm22450-201ENSMUST00000179641 107 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Mir6540-201ENSMUST00000184886 108 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm27392-201ENSMUST00000185041 101 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col8a1Q00780 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.47□□□□□ -1.85
Col8a1Q00780 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.47□□□□□ -1.85
Col8a1Q00780 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms