Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Zfp950-206ENSMUST00000178819 171 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Mir6379-201ENSMUST00000183392 115 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Mir3087-201ENSMUST00000199405 56 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm44554-201ENSMUST00000208738 147 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.61□□□□□ -2.15
Nkx3-1P97436 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm2446-201ENSMUST00000220144 772 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm32300-201ENSMUST00000221735 515 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm23723-201ENSMUST00000082996 132 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm11490-201ENSMUST00000118128 272 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm15112-201ENSMUST00000120152 860 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm15177-201ENSMUST00000120491 577 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm14915-201ENSMUST00000120747 204 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm24836-201ENSMUST00000122609 108 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm15692-201ENSMUST00000152173 352 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm22755-201ENSMUST00000157143 100 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm22037-201ENSMUST00000157280 296 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm24783-201ENSMUST00000157639 100 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm24198-201ENSMUST00000157812 108 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm29516-201ENSMUST00000190402 468 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm37162-201ENSMUST00000191708 551 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm25820-201ENSMUST00000198589 127 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm3442-201ENSMUST00000216808 710 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Nkx3-1P97436 Gm23516-201ENSMUST00000093728 107 ntBASIC1.6□□□□□ -2.15
Nkx3-1P97436 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm15183-201ENSMUST00000118933 348 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm12016-201ENSMUST00000119079 681 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm22551-201ENSMUST00000157795 103 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm24076-201ENSMUST00000158179 94 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm3221-201ENSMUST00000164869 440 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm24925-201ENSMUST00000178157 107 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm24100-201ENSMUST00000178592 79 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm26189-201ENSMUST00000179879 107 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm24137-201ENSMUST00000180055 79 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm22391-201ENSMUST00000180356 79 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm9892-201ENSMUST00000182415 992 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Mir6995-201ENSMUST00000183658 71 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm28560-201ENSMUST00000186091 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm18448-201ENSMUST00000186286 599 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm28334-201ENSMUST00000186653 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm28495-201ENSMUST00000188452 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm28232-201ENSMUST00000188683 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm28481-201ENSMUST00000189231 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm29059-201ENSMUST00000191534 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm37765-201ENSMUST00000192395 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm37237-201ENSMUST00000192893 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm36968-201ENSMUST00000193737 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm38290-201ENSMUST00000195238 315 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm18691-201ENSMUST00000203593 872 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.59□□□□□ -2.15
Nkx3-1P97436 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Nkx3-1P97436 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm24948-201ENSMUST00000082866 207 ntBASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.59□□□□□ -2.15
Nkx3-1P97436 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.59□□□□□ -2.16
Nkx3-1P97436 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.59□□□□□ -2.16
Nkx3-1P97436 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Nkx3-1P97436 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm24984-201ENSMUST00000104454 133 ntBASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm15760-201ENSMUST00000119553 283 ntBASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm14867-201ENSMUST00000120156 866 ntBASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm16412-201ENSMUST00000121602 273 ntBASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm22817-201ENSMUST00000157448 356 ntBASIC1.58□□□□□ -2.16
Nkx3-1P97436 Gm24959-201ENSMUST00000157924 146 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms