Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.36□□□□□ -2.03
Sox3P53784 Gm45522-201ENSMUST00000210784 166 ntBASIC2.36□□□□□ -2.03
Sox3P53784 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.36□□□□□ -2.03
Sox3P53784 Gm18160-201ENSMUST00000214279 827 ntBASIC2.36□□□□□ -2.03
Sox3P53784 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.36□□□□□ -2.03
Sox3P53784 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sox3P53784 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Sox3P53784 Gm25257-201ENSMUST00000083907 110 ntBASIC2.36□□□□□ -2.03
Sox3P53784 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Sox3P53784 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sox3P53784 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sox3P53784 Mir7225-201ENSMUST00000184178 54 ntBASIC2.35□□□□□ -2.03
Sox3P53784 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.35□□□□□ -2.03
Sox3P53784 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.35□□□□□ -2.03
Sox3P53784 Gm43556-201ENSMUST00000196186 681 ntBASIC2.35□□□□□ -2.03
Sox3P53784 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.35□□□□□ -2.03
Sox3P53784 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.35□□□□□ -2.03
Sox3P53784 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.35□□□□□ -2.03
Sox3P53784 Gm45395-201ENSMUST00000209891 559 ntBASIC2.35□□□□□ -2.03
Sox3P53784 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.35□□□□□ -2.03
Sox3P53784 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.35□□□□□ -2.03
Sox3P53784 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sox3P53784 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sox3P53784 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.35□□□□□ -2.03
Sox3P53784 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sox3P53784 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sox3P53784 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.35□□□□□ -2.03
Sox3P53784 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm13728-201ENSMUST00000117471 400 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox3P53784 Gm23223-201ENSMUST00000158119 127 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm22611-201ENSMUST00000158288 150 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm23352-201ENSMUST00000158428 64 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm24053-201ENSMUST00000158620 105 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm17065-201ENSMUST00000165245 239 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Sox3P53784 Gm9071-201ENSMUST00000165915 474 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm17072-201ENSMUST00000166673 658 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Sox3P53784 Gm24264-201ENSMUST00000179835 94 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm26622-201ENSMUST00000180520 298 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm27470-201ENSMUST00000184070 210 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm29429-201ENSMUST00000187071 121 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm29263-201ENSMUST00000188718 463 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm37000-201ENSMUST00000193058 428 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Trbv24-201ENSMUST00000194614 347 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm43402-201ENSMUST00000197159 159 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm43626-201ENSMUST00000198575 162 ntBASIC2.34□□□□□ -2.03
Sox3P53784 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Sox3P53784 Gm45772-201ENSMUST00000212961 240 ntBASIC2.34□□□□□ -2.03
Sox3P53784 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.34□□□□□ -2.03
Sox3P53784 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.34□□□□□ -2.03
Sox3P53784 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Gm22508-201ENSMUST00000082772 110 ntBASIC2.34□□□□□ -2.03
Sox3P53784 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sox3P53784 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
Sox3P53784 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Gm13806-201ENSMUST00000117822 325 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm12871-201ENSMUST00000118758 438 ntBASIC2.33□□□□□ -2.04
Sox3P53784 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm23137-201ENSMUST00000157559 107 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm22597-201ENSMUST00000157602 80 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm26411-201ENSMUST00000157668 107 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm23559-201ENSMUST00000157824 103 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm24306-201ENSMUST00000180229 79 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm17946-201ENSMUST00000186856 538 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm28647-201ENSMUST00000188416 197 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.33□□□□□ -2.04
Sox3P53784 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.33□□□□□ -2.04
Sox3P53784 Gm42164-201ENSMUST00000198881 379 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm45288-201ENSMUST00000210236 151 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Gm45879-201ENSMUST00000212521 392 ntBASIC2.33□□□□□ -2.04
Sox3P53784 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.33□□□□□ -2.04
Sox3P53784 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.33□□□□□ -2.04
Sox3P53784 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.33□□□□□ -2.04
Sox3P53784 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.33□□□□□ -2.04
Sox3P53784 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Sox3P53784 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.33□□□□□ -2.04
Sox3P53784 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Sox3P53784 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sox3P53784 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 Gm22752-201ENSMUST00000102083 109 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm14049-201ENSMUST00000121009 636 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms