Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm14593-201ENSMUST00000119948 294 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm11414-201ENSMUST00000121795 263 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm23214-201ENSMUST00000122716 157 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Gm16038-201ENSMUST00000159317 193 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm19932-201ENSMUST00000177033 313 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm27470-201ENSMUST00000184070 210 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Mir6363-201ENSMUST00000184880 114 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm28418-201ENSMUST00000186179 423 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm17946-201ENSMUST00000186856 538 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm28629-201ENSMUST00000187309 263 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm37029-201ENSMUST00000195773 239 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm44465-201ENSMUST00000199536 114 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm19252-201ENSMUST00000204705 305 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm45080-201ENSMUST00000206648 283 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm10161-201ENSMUST00000091506 204 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Nkx2-1P50220 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Nkx2-1P50220 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm25272-201ENSMUST00000104293 128 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm26147-201ENSMUST00000104479 114 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm13329-201ENSMUST00000117063 265 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm14392-201ENSMUST00000120332 401 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm11456-201ENSMUST00000121070 256 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm15167-201ENSMUST00000121997 187 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm26255-201ENSMUST00000122492 103 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm26277-201ENSMUST00000157097 152 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm22277-201ENSMUST00000157204 277 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm25624-201ENSMUST00000157222 275 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm22722-201ENSMUST00000157467 132 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm24505-201ENSMUST00000157682 126 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm24240-201ENSMUST00000157785 135 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm22833-201ENSMUST00000158292 132 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm25397-201ENSMUST00000176951 92 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm24757-201ENSMUST00000176987 371 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Mir6907-201ENSMUST00000183764 71 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm28843-201ENSMUST00000189198 678 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm29546-201ENSMUST00000191171 678 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm36891-201ENSMUST00000191995 655 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm33354-201ENSMUST00000195448 906 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm44373-201ENSMUST00000196112 169 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm43669-201ENSMUST00000198229 436 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.53□□□□□ -2
Nkx2-1P50220 Gm44818-201ENSMUST00000206608 358 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.53□□□□□ -2
Nkx2-1P50220 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Gm9765-201ENSMUST00000043170 321 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.53□□□□□ -2
Nkx2-1P50220 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Nkx2-1P50220 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.53□□□□□ -2
Nkx2-1P50220 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm25727-201ENSMUST00000104522 131 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm13876-201ENSMUST00000118451 261 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm22073-201ENSMUST00000122668 189 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm23213-201ENSMUST00000122715 313 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm22380-201ENSMUST00000157479 95 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm24192-201ENSMUST00000157978 145 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm24847-201ENSMUST00000158032 108 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm24546-201ENSMUST00000158652 102 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm20794-201ENSMUST00000177626 628 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm29602-201ENSMUST00000186887 442 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm28404-201ENSMUST00000190242 453 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.52□□□□□ -2.01
Nkx2-1P50220 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.52□□□□□ -2.01
Nkx2-1P50220 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms