Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm22076-201ENSMUST00000158601 84 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Col2a1P28481 Gm20415-201ENSMUST00000172877 423 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm7398-201ENSMUST00000178589 639 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm7375-201ENSMUST00000179232 639 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm3681-201ENSMUST00000179940 639 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.25□□□□□ -2.05
Col2a1P28481 Gm43043-201ENSMUST00000196579 412 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm43676-201ENSMUST00000197532 540 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm42438-201ENSMUST00000197832 974 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.25□□□□□ -2.05
Col2a1P28481 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.25□□□□□ -2.05
Col2a1P28481 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm25008-201ENSMUST00000083809 81 ntBASIC2.25□□□□□ -2.05
Col2a1P28481 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm13574-201ENSMUST00000120482 394 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.24□□□□□ -2.05
Col2a1P28481 Gm27161-201ENSMUST00000183960 562 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm27236-201ENSMUST00000184147 442 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Mir7678-201ENSMUST00000185076 71 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm29604-201ENSMUST00000187176 163 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm29597-201ENSMUST00000188035 308 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm9068-201ENSMUST00000217393 455 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Col2a1P28481 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Col2a1P28481 Gm26108-201ENSMUST00000083973 191 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.24□□□□□ -2.05
Col2a1P28481 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
Col2a1P28481 Gm25088-201ENSMUST00000101803 79 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Mir599-201ENSMUST00000102378 88 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm11460-201ENSMUST00000118200 361 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm2020-201ENSMUST00000145242 579 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm9613-201ENSMUST00000171662 196 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm28552-201ENSMUST00000190725 388 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm28211-201ENSMUST00000190920 315 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm44125-201ENSMUST00000203068 448 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm45590-201ENSMUST00000209715 262 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Gm18160-201ENSMUST00000214279 827 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col2a1P28481 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm23503-201ENSMUST00000083903 107 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Col2a1P28481 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Col2a1P28481 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.23□□□□□ -2.05
Col2a1P28481 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm25213-201ENSMUST00000102388 113 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm25560-201ENSMUST00000104606 176 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm24836-201ENSMUST00000122609 108 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm23981-201ENSMUST00000157136 106 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm23473-201ENSMUST00000158883 116 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm21754-201ENSMUST00000177550 479 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm22166-201ENSMUST00000178419 121 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm23288-201ENSMUST00000179213 121 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm28623-201ENSMUST00000187219 192 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm28802-201ENSMUST00000188624 944 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm37037-201ENSMUST00000194475 424 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm43652-201ENSMUST00000196219 675 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Mir7021-201ENSMUST00000197026 63 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm43431-201ENSMUST00000198577 340 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm43954-201ENSMUST00000204634 544 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm7726-201ENSMUST00000206241 231 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm45048-201ENSMUST00000207058 429 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm18774-201ENSMUST00000218269 601 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm4921-201ENSMUST00000219804 992 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Col2a1P28481 Gm22810-201ENSMUST00000082741 158 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm25813-201ENSMUST00000082748 191 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Gm24610-201ENSMUST00000083270 109 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Col2a1P28481 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Col2a1P28481 BC022960-201ENSMUST00000119987 1815 ntBASIC2.22□□□□□ -2.05
Col2a1P28481 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.21□□□□□ -2.05
Col2a1P28481 Gm24951-201ENSMUST00000102182 109 ntBASIC2.21□□□□□ -2.06
Col2a1P28481 Gm14566-201ENSMUST00000118915 321 ntBASIC2.21□□□□□ -2.06
Col2a1P28481 Gm14766-201ENSMUST00000121689 367 ntBASIC2.21□□□□□ -2.06
Col2a1P28481 Gm14129-201ENSMUST00000122436 291 ntBASIC2.21□□□□□ -2.06
Col2a1P28481 Gm23463-201ENSMUST00000122468 99 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms