Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6568-201ENSMUST00000122274 697 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm24439-201ENSMUST00000157894 117 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm24314-201ENSMUST00000158274 123 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm26173-201ENSMUST00000158416 136 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm24771-201ENSMUST00000158508 137 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm18396-201ENSMUST00000177095 361 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.89□□□□□ -2.11
Sdc1P18828 Gm29335-201ENSMUST00000188361 459 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.89□□□□□ -2.11
Sdc1P18828 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.89□□□□□ -2.11
Sdc1P18828 Gm9236-201ENSMUST00000196892 587 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.89□□□□□ -2.11
Sdc1P18828 Gm43810-201ENSMUST00000201018 232 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm29848-201ENSMUST00000203107 295 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm44966-201ENSMUST00000208096 157 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm29817-201ENSMUST00000210098 172 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.89□□□□□ -2.11
Sdc1P18828 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Mir30d-201ENSMUST00000083503 82 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Mir323-201ENSMUST00000083683 86 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm24698-201ENSMUST00000083883 130 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Sdc1P18828 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.88□□□□□ -2.11
Sdc1P18828 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22782-201ENSMUST00000104082 132 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Sdc1P18828 Gm25784-201ENSMUST00000122524 81 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22322-201ENSMUST00000157151 111 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22038-201ENSMUST00000157277 242 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22535-201ENSMUST00000158174 119 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm25368-201ENSMUST00000158847 131 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm23777-201ENSMUST00000158994 259 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm16561-201ENSMUST00000163001 192 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm25996-201ENSMUST00000175393 117 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm24306-201ENSMUST00000180229 79 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm27659-201ENSMUST00000183472 98 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Mir6376-201ENSMUST00000185149 131 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Mir9-1-201ENSMUST00000199907 89 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm44794-201ENSMUST00000206550 411 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm18991-201ENSMUST00000209225 746 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC1.88□□□□□ -2.11
Sdc1P18828 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 CT030182.3-201ENSMUST00000225986 582 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22508-201ENSMUST00000082772 110 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm24044-201ENSMUST00000083107 156 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm22353-201ENSMUST00000083918 136 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.88□□□□□ -2.11
Sdc1P18828 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sdc1P18828 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Sdc1P18828 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Gm6071-201ENSMUST00000119561 440 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Gm13059-201ENSMUST00000119881 398 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm13903-201ENSMUST00000120945 193 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm14564-201ENSMUST00000122159 294 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.87□□□□□ -2.11
Sdc1P18828 Gm24910-201ENSMUST00000157289 272 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm23713-201ENSMUST00000157353 70 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm25339-201ENSMUST00000157458 232 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm24138-201ENSMUST00000157572 114 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm22597-201ENSMUST00000157602 80 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm22615-201ENSMUST00000158102 70 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm24900-201ENSMUST00000158128 134 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm3470-201ENSMUST00000160819 420 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Gm2930-201ENSMUST00000170403 474 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm23619-201ENSMUST00000178411 94 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm25474-201ENSMUST00000179052 94 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm22047-201ENSMUST00000179176 94 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm26991-201ENSMUST00000180950 620 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm11395-201ENSMUST00000181011 499 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm27991-201ENSMUST00000184804 137 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Gm18964-201ENSMUST00000193013 563 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm44024-201ENSMUST00000203008 476 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm32300-201ENSMUST00000221735 515 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm9318-201ENSMUST00000222444 438 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gnrh1-202ENSMUST00000223929 428 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 AC134577.1-201ENSMUST00000227572 295 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Gm23517-201ENSMUST00000082830 192 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Snora69-201ENSMUST00000083708 131 ntBASIC1.87□□□□□ -2.11
Sdc1P18828 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Sdc1P18828 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc1P18828 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc1P18828 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Sdc1P18828 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Sdc1P18828 Gm24582-201ENSMUST00000103967 103 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms