Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Cdx1P18111 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm44182-201ENSMUST00000204052 115 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm43865-201ENSMUST00000204721 127 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm8031-201ENSMUST00000213430 626 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm7214-201ENSMUST00000222428 272 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm6369-201ENSMUST00000069626 412 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Mir127-201ENSMUST00000093568 70 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm15215-201ENSMUST00000117773 489 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm14794-201ENSMUST00000118181 192 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm12191-201ENSMUST00000118307 348 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm12550-201ENSMUST00000118478 329 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm9703-201ENSMUST00000119573 343 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm6574-201ENSMUST00000120037 362 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.92□□□□□ -2.1
Cdx1P18111 Gm23469-201ENSMUST00000157131 104 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Cdx1P18111 Mir6382-201ENSMUST00000184055 110 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28838-201ENSMUST00000186338 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm29635-201ENSMUST00000187221 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm29026-201ENSMUST00000187787 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28797-201ENSMUST00000188543 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28855-201ENSMUST00000188680 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28705-201ENSMUST00000189548 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28939-201ENSMUST00000190351 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm28223-201ENSMUST00000190469 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm29092-201ENSMUST00000190768 315 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm37771-201ENSMUST00000193121 265 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm44519-201ENSMUST00000206486 122 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm45013-201ENSMUST00000206883 178 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm46146-201ENSMUST00000217483 346 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 AC159242.1-201ENSMUST00000225832 194 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Mir300-201ENSMUST00000083485 79 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Mir301-201ENSMUST00000083655 86 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Cdx1P18111 Gm26327-201ENSMUST00000093724 111 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.92□□□□□ -2.1
Cdx1P18111 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Cdx1P18111 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.91□□□□□ -2.1
Cdx1P18111 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm24582-201ENSMUST00000103967 103 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm26342-201ENSMUST00000104557 129 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm14652-201ENSMUST00000118479 235 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm13903-201ENSMUST00000120945 193 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.91□□□□□ -2.1
Cdx1P18111 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm25863-201ENSMUST00000158249 329 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm6660-201ENSMUST00000179149 468 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm4076-201ENSMUST00000179230 965 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm24137-201ENSMUST00000180055 79 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm22391-201ENSMUST00000180356 79 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Mir6370-201ENSMUST00000183510 120 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm27722-201ENSMUST00000183908 76 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm42672-201ENSMUST00000197821 352 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm45386-201ENSMUST00000210194 218 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm45678-201ENSMUST00000210509 295 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm25007-201ENSMUST00000083808 133 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm25628-201ENSMUST00000084002 105 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Olfr575-201ENSMUST00000084812 957 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.91□□□□□ -2.1
Cdx1P18111 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Cdx1P18111 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.9□□□□□ -2.1
Cdx1P18111 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Cdx1P18111 Gm24274-201ENSMUST00000116787 124 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm11221-201ENSMUST00000117230 597 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm12765-201ENSMUST00000117273 615 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm12721-201ENSMUST00000120621 268 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm22534-201ENSMUST00000158173 104 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm24111-201ENSMUST00000175491 97 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm21885-201ENSMUST00000178891 327 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Mir6905-201ENSMUST00000184228 70 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm43264-201ENSMUST00000202284 325 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Cdx1P18111 Mir350-201ENSMUST00000083639 99 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm26166-201ENSMUST00000083788 107 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms