Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23641-201ENSMUST00000157857 101 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm23196-201ENSMUST00000158806 107 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm25615-201ENSMUST00000177836 94 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm24497-201ENSMUST00000177868 191 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm27834-201ENSMUST00000183427 125 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.4□□□□□ -1.71
RaraP11416 Gm30341-201ENSMUST00000194363 289 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm45860-201ENSMUST00000212700 334 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm45907-201ENSMUST00000213023 193 ntBASIC4.4□□□□□ -1.71
RaraP11416 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.4□□□□□ -1.71
RaraP11416 Gm46998-201ENSMUST00000221444 330 ntBASIC4.4□□□□□ -1.71
RaraP11416 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm23444-201ENSMUST00000082922 191 ntBASIC4.4□□□□□ -1.71
RaraP11416 Gm23099-201ENSMUST00000083454 139 ntBASIC4.4□□□□□ -1.71
RaraP11416 Mir346-201ENSMUST00000083547 98 ntBASIC4.4□□□□□ -1.71
RaraP11416 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RaraP11416 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RaraP11416 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.39□□□□□ -1.71
RaraP11416 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RaraP11416 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RaraP11416 Gm24831-201ENSMUST00000116778 126 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm15377-201ENSMUST00000119594 246 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm14782-201ENSMUST00000120151 195 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm15223-201ENSMUST00000120989 826 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm25321-201ENSMUST00000122558 102 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm25863-201ENSMUST00000158249 329 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm22989-201ENSMUST00000158313 86 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm24308-201ENSMUST00000177773 114 ntBASIC4.39□□□□□ -1.71
RaraP11416 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm38270-201ENSMUST00000192721 407 ntBASIC4.39□□□□□ -1.71
RaraP11416 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm42623-201ENSMUST00000197225 379 ntBASIC4.39□□□□□ -1.71
RaraP11416 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.39□□□□□ -1.71
RaraP11416 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.39□□□□□ -1.71
RaraP11416 Gm22350-201ENSMUST00000083924 156 ntBASIC4.39□□□□□ -1.71
RaraP11416 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RaraP11416 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.39□□□□□ -1.71
RaraP11416 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RaraP11416 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.38□□□□□ -1.71
RaraP11416 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.38□□□□□ -1.71
RaraP11416 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RaraP11416 Gm24318-201ENSMUST00000104490 131 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.38□□□□□ -1.71
RaraP11416 Gm15180-201ENSMUST00000117745 492 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm11819-201ENSMUST00000122192 372 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.38□□□□□ -1.71
RaraP11416 Gm23782-201ENSMUST00000157939 120 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm22637-201ENSMUST00000158144 283 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm25606-201ENSMUST00000158363 95 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm17159-201ENSMUST00000169043 482 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm17186-201ENSMUST00000171742 456 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm28755-201ENSMUST00000185773 199 ntBASIC4.38□□□□□ -1.71
RaraP11416 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Gm43704-201ENSMUST00000196164 496 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.38□□□□□ -1.71
RaraP11416 Gm30674-201ENSMUST00000214523 392 ntBASIC4.38□□□□□ -1.71
RaraP11416 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Gm22294-201ENSMUST00000083308 104 ntBASIC4.38□□□□□ -1.71
RaraP11416 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.38□□□□□ -1.71
RaraP11416 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.38□□□□□ -1.71
RaraP11416 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RaraP11416 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RaraP11416 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RaraP11416 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.37□□□□□ -1.71
RaraP11416 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm22657-201ENSMUST00000104197 132 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm25421-201ENSMUST00000104218 164 ntBASIC4.37□□□□□ -1.71
RaraP11416 Mir294-201ENSMUST00000104710 84 ntBASIC4.37□□□□□ -1.71
RaraP11416 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.37□□□□□ -1.71
RaraP11416 Gm25599-201ENSMUST00000157816 103 ntBASIC4.37□□□□□ -1.71
RaraP11416 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.37□□□□□ -1.71
RaraP11416 Gm24799-201ENSMUST00000178431 79 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm27414-201ENSMUST00000185033 381 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm37300-201ENSMUST00000193327 280 ntBASIC4.37□□□□□ -1.71
RaraP11416 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm45317-201ENSMUST00000210385 223 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm45420-201ENSMUST00000211243 425 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RaraP11416 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RaraP11416 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.37□□□□□ -1.71
RaraP11416 Gm22247-201ENSMUST00000082476 131 ntBASIC4.37□□□□□ -1.71
RaraP11416 Gm25896-201ENSMUST00000083713 136 ntBASIC4.37□□□□□ -1.71
RaraP11416 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RaraP11416 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.37□□□□□ -1.71
RaraP11416 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RaraP11416 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RaraP11416 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.37□□□□□ -1.71
RaraP11416 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.36□□□□□ -1.71
RaraP11416 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RaraP11416 Gm15613-201ENSMUST00000118396 326 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms