Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Lire1P11260 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.6□□□□□ -1.99
Lire1P11260 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Lire1P11260 Gm26147-201ENSMUST00000104479 114 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm25563-201ENSMUST00000104603 74 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm14852-201ENSMUST00000120065 647 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm14049-201ENSMUST00000121009 636 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm23895-201ENSMUST00000158108 160 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm26271-201ENSMUST00000158349 104 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm25368-201ENSMUST00000158847 131 ntBASIC2.59□□□□□ -1.99
Lire1P11260 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Lire1P11260 Gm18964-201ENSMUST00000193013 563 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.59□□□□□ -1.99
Lire1P11260 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Gm44256-201ENSMUST00000203304 335 ntBASIC2.59□□□□□ -1.99
Lire1P11260 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.59□□□□□ -1.99
Lire1P11260 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.59□□□□□ -1.99
Lire1P11260 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.59□□□□□ -1.99
Lire1P11260 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.59□□□□□ -1.99
Lire1P11260 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Lire1P11260 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.59□□□□□ -2
Lire1P11260 Gm13581-201ENSMUST00000120675 278 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC2.58□□□□□ -2
Lire1P11260 Gm25360-201ENSMUST00000178786 191 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm37757-201ENSMUST00000193072 210 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm43669-201ENSMUST00000198229 436 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm34314-201ENSMUST00000203622 367 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm44182-201ENSMUST00000204052 115 ntBASIC2.58□□□□□ -2
Lire1P11260 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.58□□□□□ -2
Lire1P11260 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm46389-201ENSMUST00000223199 392 ntBASIC2.58□□□□□ -2
Lire1P11260 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm10025-201ENSMUST00000079568 372 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm26446-201ENSMUST00000082455 103 ntBASIC2.58□□□□□ -2
Lire1P11260 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lire1P11260 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Lire1P11260 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.58□□□□□ -2
Lire1P11260 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Lire1P11260 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lire1P11260 Gm22782-201ENSMUST00000104082 132 ntBASIC2.57□□□□□ -2
Lire1P11260 Snora36b-201ENSMUST00000104383 132 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm11460-201ENSMUST00000118200 361 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm15211-201ENSMUST00000118932 528 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm12646-201ENSMUST00000119144 238 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm11943-201ENSMUST00000119473 327 ntBASIC2.57□□□□□ -2
Lire1P11260 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.57□□□□□ -2
Lire1P11260 Gm22141-201ENSMUST00000157403 277 ntBASIC2.57□□□□□ -2
Lire1P11260 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.57□□□□□ -2
Lire1P11260 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.57□□□□□ -2
Lire1P11260 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm21673-201ENSMUST00000186640 436 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm21135-201ENSMUST00000189023 436 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm28299-201ENSMUST00000189908 339 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm18692-201ENSMUST00000193047 511 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.57□□□□□ -2
Lire1P11260 Gm10297-201ENSMUST00000207136 651 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm45232-201ENSMUST00000207811 162 ntBASIC2.57□□□□□ -2
Lire1P11260 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm29817-201ENSMUST00000210098 172 ntBASIC2.57□□□□□ -2
Lire1P11260 AC155305.1-201ENSMUST00000222207 319 ntBASIC2.57□□□□□ -2
Lire1P11260 Snora23-201ENSMUST00000082517 184 ntBASIC2.57□□□□□ -2
Lire1P11260 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.57□□□□□ -2
Lire1P11260 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Lire1P11260 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lire1P11260 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lire1P11260 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.57□□□□□ -2
Lire1P11260 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Lire1P11260 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
Lire1P11260 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Lire1P11260 Gm22091-201ENSMUST00000116908 127 ntBASIC2.56□□□□□ -2
Lire1P11260 Gm24907-201ENSMUST00000116932 128 ntBASIC2.56□□□□□ -2
Lire1P11260 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.56□□□□□ -2
Lire1P11260 Gm23885-201ENSMUST00000122682 294 ntBASIC2.56□□□□□ -2
Lire1P11260 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Lire1P11260 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.56□□□□□ -2
Lire1P11260 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.56□□□□□ -2
Lire1P11260 Gm24910-201ENSMUST00000157289 272 ntBASIC2.56□□□□□ -2
Lire1P11260 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.56□□□□□ -2
Lire1P11260 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.56□□□□□ -2
Lire1P11260 Gm24464-201ENSMUST00000179697 107 ntBASIC2.56□□□□□ -2
Lire1P11260 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lire1P11260 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.56□□□□□ -2
Lire1P11260 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.56□□□□□ -2
Lire1P11260 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.56□□□□□ -2
Lire1P11260 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.56□□□□□ -2
Lire1P11260 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.56□□□□□ -2
Lire1P11260 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.55□□□□□ -2
Lire1P11260 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Lire1P11260 Gm25153-201ENSMUST00000157118 156 ntBASIC2.55□□□□□ -2
Lire1P11260 Mir5123-201ENSMUST00000177794 83 ntBASIC2.55□□□□□ -2
Lire1P11260 Mir7013-201ENSMUST00000183540 72 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm9236-201ENSMUST00000196892 587 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm42164-201ENSMUST00000198881 379 ntBASIC2.55□□□□□ -2
Lire1P11260 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm42578-201ENSMUST00000199960 194 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm17991-201ENSMUST00000208139 297 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.55□□□□□ -2
Lire1P11260 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms