Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm22598-201ENSMUST00000157600 127 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm23557-201ENSMUST00000157820 138 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm24501-201ENSMUST00000158452 62 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm24739-201ENSMUST00000158855 292 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm22114-201ENSMUST00000177756 107 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm27747-201ENSMUST00000184707 85 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm28534-201ENSMUST00000187744 676 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm44349-201ENSMUST00000197048 123 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm42672-201ENSMUST00000197821 352 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm43155-201ENSMUST00000202661 494 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm35931-201ENSMUST00000203931 448 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm16419-201ENSMUST00000221057 625 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.3□□□□□ -1.88
Lmx1bO88609 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lmx1bO88609 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Lmx1bO88609 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lmx1bO88609 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lmx1bO88609 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Mir701-201ENSMUST00000102208 109 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm25272-201ENSMUST00000104293 128 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm14537-201ENSMUST00000117464 599 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm13314-201ENSMUST00000118742 335 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm15213-201ENSMUST00000122098 216 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm25341-201ENSMUST00000157461 268 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm23540-201ENSMUST00000157543 164 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Mir1934-201ENSMUST00000158127 83 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm17065-201ENSMUST00000165245 239 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm24818-201ENSMUST00000175093 161 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm23864-201ENSMUST00000177607 107 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Mir6346-201ENSMUST00000183982 81 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm5829-201ENSMUST00000191383 351 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm25203-202ENSMUST00000200458 216 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm26225-201ENSMUST00000082508 135 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm25203-201ENSMUST00000082842 215 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm25480-201ENSMUST00000083217 133 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Lmx1bO88609 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lmx1bO88609 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Lmx1bO88609 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.29□□□□□ -1.88
Lmx1bO88609 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lmx1bO88609 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.28□□□□□ -1.88
Lmx1bO88609 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm24987-201ENSMUST00000104453 134 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm14774-201ENSMUST00000117857 536 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm12647-201ENSMUST00000118977 265 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm24008-201ENSMUST00000157733 138 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm26045-201ENSMUST00000157862 97 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm27510-201ENSMUST00000158214 64 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm25606-201ENSMUST00000158363 95 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm22911-201ENSMUST00000177920 107 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm26585-201ENSMUST00000180890 630 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm27477-201ENSMUST00000184649 143 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.28□□□□□ -1.88
Lmx1bO88609 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Gm28288-201ENSMUST00000191019 214 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.28□□□□□ -1.88
Lmx1bO88609 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lmx1bO88609 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm24127-201ENSMUST00000104110 130 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm23988-201ENSMUST00000117034 122 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm13873-201ENSMUST00000119208 427 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm14775-201ENSMUST00000122089 310 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm12956-201ENSMUST00000122184 414 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm23168-201ENSMUST00000157156 143 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm24909-201ENSMUST00000157290 280 ntBASIC3.27□□□□□ -1.89
Lmx1bO88609 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms