Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm29573-201ENSMUST00000190291 919 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm44718-201ENSMUST00000206886 359 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm25124-201ENSMUST00000083345 164 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm24490-201ENSMUST00000083803 98 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col5a1O88207 Mir669l-201ENSMUST00000103771 98 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm15108-201ENSMUST00000116160 803 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm15106-201ENSMUST00000119691 821 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm15177-201ENSMUST00000120491 577 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm23025-201ENSMUST00000158769 111 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm20415-201ENSMUST00000172877 423 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm26968-201ENSMUST00000182894 481 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm28489-201ENSMUST00000186655 316 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm31230-201ENSMUST00000199725 785 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm43407-201ENSMUST00000199816 317 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm44125-201ENSMUST00000203068 448 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm20039-201ENSMUST00000210329 394 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm24044-201ENSMUST00000083107 156 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Gm23097-201ENSMUST00000083448 105 ntBASIC1.74□□□□□ -2.13
Col5a1O88207 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col5a1O88207 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Col5a1O88207 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col5a1O88207 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm6923-201ENSMUST00000118343 406 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Snrpert-201ENSMUST00000121967 279 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm24836-201ENSMUST00000122609 108 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm5967-201ENSMUST00000172723 494 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Col5a1O88207 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm25874-201ENSMUST00000178030 79 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm23619-201ENSMUST00000178411 94 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm25474-201ENSMUST00000179052 94 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm22047-201ENSMUST00000179176 94 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm24968-201ENSMUST00000179817 107 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm18185-201ENSMUST00000186725 667 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm28163-201ENSMUST00000187099 325 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm28474-201ENSMUST00000188501 315 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm29553-201ENSMUST00000189692 279 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm28744-201ENSMUST00000189939 340 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm45439-201ENSMUST00000211723 359 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.73□□□□□ -2.13
Col5a1O88207 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Gm26301-201ENSMUST00000104813 95 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm11357-201ENSMUST00000119758 954 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm11420-201ENSMUST00000120047 402 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm22236-201ENSMUST00000157093 106 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm22733-201ENSMUST00000158094 91 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm23379-201ENSMUST00000180026 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms