Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
Cacna1bO55017 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm23723-201ENSMUST00000082996 132 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.21□□□□□ -2.22
Cacna1bO55017 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Cacna1bO55017 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Cacna1bO55017 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm13676-201ENSMUST00000122185 591 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm25107-201ENSMUST00000122472 129 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm25666-201ENSMUST00000157702 107 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm22843-201ENSMUST00000157710 134 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm6060-201ENSMUST00000188671 251 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm29288-201ENSMUST00000191582 901 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Gm17935-201ENSMUST00000196649 772 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.21□□□□□ -2.22
Cacna1bO55017 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Cacna1bO55017 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Cacna1bO55017 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm2005-201ENSMUST00000120759 542 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm26101-201ENSMUST00000157246 105 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm23415-201ENSMUST00000175519 83 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm11395-201ENSMUST00000181011 499 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm44088-201ENSMUST00000204595 237 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm45146-201ENSMUST00000207108 221 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm4921-201ENSMUST00000219804 992 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm30738-201ENSMUST00000221346 502 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cacna1bO55017 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm42852-201ENSMUST00000202649 1379 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm12351-201ENSMUST00000118727 292 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm14566-201ENSMUST00000118915 321 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm11785-201ENSMUST00000120165 601 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Mir5099-201ENSMUST00000175257 74 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm8532-201ENSMUST00000179174 461 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm18546-201ENSMUST00000197245 676 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm43142-201ENSMUST00000198670 361 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm43979-201ENSMUST00000203179 475 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm43978-201ENSMUST00000203491 451 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm24928-201ENSMUST00000083399 107 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Gm25897-201ENSMUST00000083709 107 ntBASIC1.2□□□□□ -2.22
Cacna1bO55017 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cacna1bO55017 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cacna1bO55017 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm24773-201ENSMUST00000158513 99 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm25026-201ENSMUST00000175017 188 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm26701-201ENSMUST00000181571 234 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm27161-201ENSMUST00000183960 562 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm43541-201ENSMUST00000197208 581 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm42774-201ENSMUST00000198854 283 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm44830-201ENSMUST00000207667 584 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 AC127302.1-201ENSMUST00000215973 1111 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm25792-201ENSMUST00000083289 100 ntBASIC1.19□□□□□ -2.22
Cacna1bO55017 Gm14126-201ENSMUST00000122345 395 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm22392-201ENSMUST00000177971 107 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm28779-201ENSMUST00000189678 323 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm28951-201ENSMUST00000190742 313 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm32033-201ENSMUST00000193483 339 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm44727-201ENSMUST00000204225 451 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm11490-201ENSMUST00000118128 272 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm14517-201ENSMUST00000119040 337 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm14940-201ENSMUST00000119309 495 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm22390-201ENSMUST00000157588 325 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm25715-201ENSMUST00000158627 125 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cacna1bO55017 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm27582-201ENSMUST00000184084 126 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm29263-201ENSMUST00000188718 463 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm28384-201ENSMUST00000189079 463 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm44634-201ENSMUST00000206119 152 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Gm23932-201ENSMUST00000082914 107 ntBASIC1.18□□□□□ -2.22
Cacna1bO55017 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.18□□□□□ -2.22
Cacna1bO55017 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms