Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm22098-201ENSMUST00000157930 85 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm24958-201ENSMUST00000158009 97 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm8338-201ENSMUST00000163928 363 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm3027-201ENSMUST00000167579 451 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Prom1O54990 Gm25671-201ENSMUST00000178612 105 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm23307-201ENSMUST00000179167 105 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm25286-201ENSMUST00000179790 105 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.38□□□□□ -1.87
Prom1O54990 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC3.38□□□□□ -1.87
Prom1O54990 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Prom1O54990 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Prom1O54990 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Prom1O54990 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Prom1O54990 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Prom1O54990 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Prom1O54990 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Prom1O54990 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.38□□□□□ -1.87
Prom1O54990 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Prom1O54990 Gm14119-201ENSMUST00000119511 235 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm11456-201ENSMUST00000121070 256 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm23867-201ENSMUST00000122649 274 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm24191-201ENSMUST00000157977 122 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm22085-201ENSMUST00000158344 110 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm22668-201ENSMUST00000158716 260 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm27535-201ENSMUST00000183814 157 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm28008-201ENSMUST00000184021 186 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm27308-201ENSMUST00000184807 233 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm28579-201ENSMUST00000186143 369 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm29429-201ENSMUST00000187071 121 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm44468-201ENSMUST00000199516 105 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm43406-201ENSMUST00000200356 334 ntBASIC3.37□□□□□ -1.87
Prom1O54990 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Prom1O54990 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Snord42a-201ENSMUST00000082606 65 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm25475-201ENSMUST00000082825 180 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Prom1O54990 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Prom1O54990 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Prom1O54990 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Prom1O54990 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.37□□□□□ -1.87
Prom1O54990 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.37□□□□□ -1.87
Prom1O54990 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.37□□□□□ -1.87
Prom1O54990 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Prom1O54990 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.36□□□□□ -1.87
Prom1O54990 Gm22496-201ENSMUST00000104493 88 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Prom1O54990 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
Prom1O54990 Gm25220-201ENSMUST00000157546 95 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm22611-201ENSMUST00000158288 150 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm26215-201ENSMUST00000158584 139 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Prom1O54990 Gm25175-201ENSMUST00000178712 79 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm28724-201ENSMUST00000186149 625 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm7837-201ENSMUST00000190873 412 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm28155-201ENSMUST00000191066 151 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.36□□□□□ -1.87
Prom1O54990 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.36□□□□□ -1.87
Prom1O54990 Gm44825-201ENSMUST00000207557 150 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm44598-201ENSMUST00000207566 150 ntBASIC3.36□□□□□ -1.87
Prom1O54990 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.36□□□□□ -1.87
Prom1O54990 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.36□□□□□ -1.87
Prom1O54990 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.36□□□□□ -1.87
Prom1O54990 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Prom1O54990 Gm23851-201ENSMUST00000083831 103 ntBASIC3.36□□□□□ -1.87
Prom1O54990 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prom1O54990 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Prom1O54990 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Prom1O54990 Gm15244-201ENSMUST00000121122 130 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Mir1898-201ENSMUST00000122643 83 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm15914-201ENSMUST00000161922 309 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm25397-201ENSMUST00000176951 92 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm27532-201ENSMUST00000183726 113 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm28002-201ENSMUST00000184832 100 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm43669-201ENSMUST00000198229 436 ntBASIC3.35□□□□□ -1.87
Prom1O54990 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.35□□□□□ -1.87
Prom1O54990 Gm9818-201ENSMUST00000050900 255 ntBASIC3.35□□□□□ -1.87
Prom1O54990 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Prom1O54990 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Prom1O54990 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.35□□□□□ -1.87
Prom1O54990 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.35□□□□□ -1.87
Prom1O54990 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Prom1O54990 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Prom1O54990 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Prom1O54990 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms