Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm22488-201ENSMUST00000116811 127 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm8666-201ENSMUST00000117517 292 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm14688-201ENSMUST00000119169 303 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm15223-201ENSMUST00000120989 826 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm25664-201ENSMUST00000157697 107 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm24084-201ENSMUST00000175173 137 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm37670-201ENSMUST00000193622 229 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm43651-201ENSMUST00000199796 439 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm7041-201ENSMUST00000201227 524 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Gm22744-201ENSMUST00000083444 65 ntBASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Pcdh1F7BJK1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm8244-201ENSMUST00000121254 264 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm25384-201ENSMUST00000157807 105 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm22447-201ENSMUST00000158155 92 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm28453-203ENSMUST00000187041 189 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm42578-201ENSMUST00000199960 194 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm44533-201ENSMUST00000207782 268 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm44938-201ENSMUST00000208614 427 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm29774-201ENSMUST00000219270 436 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm22062-201ENSMUST00000082563 107 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Pcdh1F7BJK1 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm24121-201ENSMUST00000102029 106 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm15846-201ENSMUST00000116022 320 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm15613-201ENSMUST00000118396 326 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm13541-201ENSMUST00000119519 283 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm9003-201ENSMUST00000121810 482 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm14770-201ENSMUST00000122197 312 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Trav20-201ENSMUST00000142754 347 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm25392-201ENSMUST00000157335 297 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm24930-201ENSMUST00000158315 83 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm24001-201ENSMUST00000158463 85 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm26362-201ENSMUST00000158865 315 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Mir6383-201ENSMUST00000184545 116 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm28849-201ENSMUST00000188127 174 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm29428-201ENSMUST00000190086 409 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm28330-201ENSMUST00000190353 171 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm19123-201ENSMUST00000190716 651 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm9818-201ENSMUST00000050900 255 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm22247-201ENSMUST00000082476 131 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm24948-201ENSMUST00000082866 207 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Snora31-201ENSMUST00000083213 130 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms