Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23697-201ENSMUST00000103897 110 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm22676-201ENSMUST00000116972 129 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15211-201ENSMUST00000118932 528 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15497-201ENSMUST00000119137 551 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm14678-201ENSMUST00000121396 482 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm11645-201ENSMUST00000121589 649 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm25104-201ENSMUST00000122476 163 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm6058-201ENSMUST00000154261 399 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm25965-201ENSMUST00000157170 93 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm24911-201ENSMUST00000157292 136 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23716-201ENSMUST00000157348 144 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23331-201ENSMUST00000157423 108 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23120-201ENSMUST00000157654 287 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm24014-201ENSMUST00000157728 157 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm22382-201ENSMUST00000158185 130 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23476-201ENSMUST00000158881 274 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm16038-201ENSMUST00000159317 193 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm2862-201ENSMUST00000161524 328 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm25019-201ENSMUST00000179732 110 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm27640-201ENSMUST00000184580 147 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm2950-201ENSMUST00000185530 520 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm28717-201ENSMUST00000189950 315 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm37162-201ENSMUST00000191708 551 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm32033-201ENSMUST00000193483 339 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43669-201ENSMUST00000198229 436 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm44468-201ENSMUST00000199516 105 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43651-201ENSMUST00000199796 439 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43155-201ENSMUST00000202661 494 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm44259-201ENSMUST00000204996 298 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm45553-201ENSMUST00000209929 507 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm25651-201ENSMUST00000083782 119 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm25937-201ENSMUST00000083912 107 ntBASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.57□□□□□ -2
Trav13d-4A0A0G2JFX3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15846-201ENSMUST00000116022 320 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm22113-201ENSMUST00000158343 104 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Mir3062-201ENSMUST00000174986 105 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm24819-201ENSMUST00000175094 166 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm6625-201ENSMUST00000177870 272 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm5829-201ENSMUST00000191383 351 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43286-201ENSMUST00000197420 424 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43415-201ENSMUST00000201934 750 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm32222-201ENSMUST00000203296 298 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm45162-201ENSMUST00000209013 618 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm24950-201ENSMUST00000082768 191 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23971-201ENSMUST00000083317 191 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23849-201ENSMUST00000083833 191 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23041-201ENSMUST00000083868 106 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm26316-201ENSMUST00000083886 191 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trav13d-4A0A0G2JFX3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm9059-201ENSMUST00000118319 183 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm13210-201ENSMUST00000121483 273 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15065-201ENSMUST00000121699 273 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm23779-201ENSMUST00000157938 64 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm26400-201ENSMUST00000175012 85 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Mir5134-201ENSMUST00000175529 78 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Trav13d-4A0A0G2JFX3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms