Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Mir344c-201ENSMUST00000103919 92 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm25407-201ENSMUST00000104102 134 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm22771-201ENSMUST00000104449 91 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm26147-201ENSMUST00000104479 114 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm22496-201ENSMUST00000104493 88 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm15266-201ENSMUST00000119635 255 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 AA413626-201ENSMUST00000121125 494 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm24393-201ENSMUST00000158135 97 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm22611-201ENSMUST00000158288 150 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm24086-201ENSMUST00000175171 98 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm25175-201ENSMUST00000178712 79 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm22633-201ENSMUST00000179834 107 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm23379-201ENSMUST00000180026 107 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm27245-201ENSMUST00000184385 376 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm21673-201ENSMUST00000186640 436 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm18185-201ENSMUST00000186725 667 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm21135-201ENSMUST00000189023 436 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm18296-201ENSMUST00000192475 783 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm38311-201ENSMUST00000192945 165 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm37029-201ENSMUST00000195773 239 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm43955-201ENSMUST00000204332 142 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm45366-201ENSMUST00000209828 384 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn3Q9Z0G9 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm12191-201ENSMUST00000118307 348 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm11598-201ENSMUST00000119257 357 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm9703-201ENSMUST00000119573 343 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm14333-201ENSMUST00000130484 264 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm23068-201ENSMUST00000158239 293 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm23144-201ENSMUST00000180226 107 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm18775-201ENSMUST00000190763 586 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm43355-201ENSMUST00000196541 346 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm44923-201ENSMUST00000206673 85 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm22572-201ENSMUST00000082985 105 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Olfr895-201ENSMUST00000093864 951 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Gm10343-201ENSMUST00000096279 348 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.51□□□□□ -2.01
Cldn3Q9Z0G9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm14579-201ENSMUST00000117068 283 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm12225-201ENSMUST00000117995 298 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm12617-201ENSMUST00000121268 381 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm14766-201ENSMUST00000121689 367 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm26275-201ENSMUST00000157101 268 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm20660-201ENSMUST00000177515 289 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Mir7j-201ENSMUST00000184427 122 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm28356-202ENSMUST00000187566 858 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm17906-201ENSMUST00000202480 901 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm19252-201ENSMUST00000204705 305 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm44519-201ENSMUST00000206486 122 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Gm24268-201ENSMUST00000082990 110 ntBASIC2.5□□□□□ -2.01
Cldn3Q9Z0G9 Mir208a-201ENSMUST00000083498 83 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms