Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Mir6394-201ENSMUST00000184738 99 ntBASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Trbv22-201ENSMUST00000191697 291 ntBASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Gm7984-201ENSMUST00000060640 538 ntBASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.38□□□□□ -2.19
Scn8aQ9WTU3 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm23431-201ENSMUST00000104006 107 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm22270-201ENSMUST00000104034 132 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm23137-201ENSMUST00000157559 107 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm25365-201ENSMUST00000158852 121 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.37□□□□□ -2.19
Scn8aQ9WTU3 Gm14049-201ENSMUST00000121009 636 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm12313-201ENSMUST00000121347 421 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm5224-201ENSMUST00000183060 350 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Mir8119-201ENSMUST00000183371 129 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm45365-201ENSMUST00000209489 256 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm18338-201ENSMUST00000222381 560 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm26055-201ENSMUST00000083038 107 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Mir343-201ENSMUST00000102360 75 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Mir3066-201ENSMUST00000175296 83 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Scn8aQ9WTU3 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm18964-201ENSMUST00000193013 563 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm17937-201ENSMUST00000197908 742 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm7065-201ENSMUST00000222150 474 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm23727-201ENSMUST00000083352 164 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm24928-201ENSMUST00000083399 107 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm25897-201ENSMUST00000083709 107 ntBASIC1.35□□□□□ -2.19
Scn8aQ9WTU3 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm25170-201ENSMUST00000104191 129 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm11575-201ENSMUST00000122243 228 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm2930-201ENSMUST00000170403 474 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm9318-201ENSMUST00000222444 438 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.34□□□□□ -2.19
Scn8aQ9WTU3 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm13510-201ENSMUST00000118659 429 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm15029-201ENSMUST00000119742 199 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm11384-201ENSMUST00000121376 303 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm13409-201ENSMUST00000122072 546 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm26049-201ENSMUST00000157313 108 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm43739-201ENSMUST00000198294 307 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm44818-201ENSMUST00000206608 358 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Gm35262-201ENSMUST00000215133 267 ntBASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.2
Scn8aQ9WTU3 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms