Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir706-201ENSMUST00000102262 84 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm14931-201ENSMUST00000111079 253 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm11219-201ENSMUST00000118565 358 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm12607-201ENSMUST00000120724 493 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 U6.1-201ENSMUST00000157443 101 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm22843-201ENSMUST00000157710 134 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm25335-201ENSMUST00000158043 103 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm22257-201ENSMUST00000158687 301 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm23819-201ENSMUST00000158744 109 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Mir6917-201ENSMUST00000184111 61 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm37377-201ENSMUST00000191733 304 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm37000-201ENSMUST00000193058 428 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm43232-201ENSMUST00000201346 364 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm44212-201ENSMUST00000205016 897 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm25124-201ENSMUST00000083345 164 ntBASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.84□□□□□ -2.11
Lima1Q9ERG0 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Lima1Q9ERG0 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm24340-201ENSMUST00000104208 97 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Mir883a-201ENSMUST00000104824 76 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm12935-201ENSMUST00000119352 246 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm11785-201ENSMUST00000120165 601 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm14629-201ENSMUST00000122428 144 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm24716-201ENSMUST00000157524 104 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm24358-201ENSMUST00000158424 288 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm25051-201ENSMUST00000158602 249 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm4468-201ENSMUST00000170206 294 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Mir5118-201ENSMUST00000175551 67 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm27511-201ENSMUST00000183502 127 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm27676-201ENSMUST00000183669 61 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm43708-201ENSMUST00000198857 961 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm43171-201ENSMUST00000199882 291 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Mir7215-201ENSMUST00000200383 51 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm5317-201ENSMUST00000204445 847 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm24948-201ENSMUST00000082866 207 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Mir301-201ENSMUST00000083655 86 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Lima1Q9ERG0 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm14594-201ENSMUST00000118052 537 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm14590-201ENSMUST00000118934 537 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm13433-201ENSMUST00000121701 240 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm12872-201ENSMUST00000121835 320 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm13602-201ENSMUST00000122405 493 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm6395-201ENSMUST00000167639 691 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm22192-201ENSMUST00000175128 85 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm24264-201ENSMUST00000179835 94 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm14596-201ENSMUST00000180268 537 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm14595-201ENSMUST00000180335 537 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm37778-201ENSMUST00000191732 190 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm38268-201ENSMUST00000195813 193 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm43582-201ENSMUST00000196149 343 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Mir378a-201ENSMUST00000198300 66 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm44533-201ENSMUST00000207782 268 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Lima1Q9ERG0 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm25632-201ENSMUST00000083112 85 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Mir222-201ENSMUST00000083537 79 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm25007-201ENSMUST00000083808 133 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.82□□□□□ -2.12
Lima1Q9ERG0 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm14657-201ENSMUST00000117461 302 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm15536-201ENSMUST00000121411 114 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm23885-201ENSMUST00000122682 294 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm25113-201ENSMUST00000157185 143 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm8207-201ENSMUST00000171204 502 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm26177-201ENSMUST00000178683 107 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm21758-201ENSMUST00000179336 819 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm28163-201ENSMUST00000187099 325 ntBASIC1.81□□□□□ -2.12
Lima1Q9ERG0 Gm29647-201ENSMUST00000188795 666 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms