Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm11935-201ENSMUST00000118608 399 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm11456-201ENSMUST00000121070 256 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm24481-201ENSMUST00000157210 102 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm27592-201ENSMUST00000157729 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22389-201ENSMUST00000158193 301 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm23759-201ENSMUST00000158351 268 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22839-201ENSMUST00000158436 304 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm24664-201ENSMUST00000158939 100 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm17065-201ENSMUST00000165245 239 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22174-201ENSMUST00000175050 125 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22692-201ENSMUST00000175055 125 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm27634-201ENSMUST00000175060 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm26460-201ENSMUST00000175061 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22460-201ENSMUST00000175269 124 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm24365-201ENSMUST00000175384 125 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm44310-201ENSMUST00000175424 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm22639-201ENSMUST00000175591 125 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm26426-201ENSMUST00000177866 123 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm24979-201ENSMUST00000178626 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm26060-201ENSMUST00000180094 123 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm27743-201ENSMUST00000185136 126 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm29397-201ENSMUST00000185205 333 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm28830-201ENSMUST00000188192 213 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm43286-201ENSMUST00000197420 424 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm25821-201ENSMUST00000093657 133 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf1Q9EPU0 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm13457-201ENSMUST00000117885 267 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm15994-201ENSMUST00000118029 402 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm23184-201ENSMUST00000122594 131 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm24937-201ENSMUST00000122597 134 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm26320-201ENSMUST00000157742 306 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm22099-201ENSMUST00000157925 123 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm17187-201ENSMUST00000164622 410 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm27828-201ENSMUST00000184108 119 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm45005-201ENSMUST00000206640 157 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 LOC667541-201ENSMUST00000223408 278 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Gm25630-201ENSMUST00000084000 162 ntBASIC4.42□□□□□ -1.7
Upf1Q9EPU0 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
Upf1Q9EPU0 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm36989-201ENSMUST00000193225 2160 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm650-201ENSMUST00000144428 1551 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm25391-201ENSMUST00000157342 134 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm27510-201ENSMUST00000158214 64 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm23615-201ENSMUST00000082602 65 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Upf1Q9EPU0 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Upf1Q9EPU0 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.4□□□□□ -1.7
Upf1Q9EPU0 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Upf1Q9EPU0 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Upf1Q9EPU0 Gm25485-201ENSMUST00000104120 132 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm13725-201ENSMUST00000122139 207 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm26020-201ENSMUST00000122729 183 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm24858-201ENSMUST00000158058 323 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm5175-202ENSMUST00000219699 529 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm23845-201ENSMUST00000083834 152 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Gm25257-201ENSMUST00000083907 110 ntBASIC4.4□□□□□ -1.71
Upf1Q9EPU0 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms