Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir6537-201ENSMUST00000184150 110 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm42647-201ENSMUST00000195939 459 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm44092-201ENSMUST00000204470 258 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm44650-201ENSMUST00000206929 194 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm45420-201ENSMUST00000211243 425 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm23928-201ENSMUST00000082469 145 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm23847-201ENSMUST00000083829 110 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim47Q8C0E3 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim47Q8C0E3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Trim47Q8C0E3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Trim47Q8C0E3 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Mir669b-201ENSMUST00000102172 97 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm14073-201ENSMUST00000117344 381 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm13992-201ENSMUST00000120558 156 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm14916-201ENSMUST00000121904 204 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm10444-201ENSMUST00000126708 148 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm22211-201ENSMUST00000158097 156 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm24636-201ENSMUST00000158673 288 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm25162-201ENSMUST00000158906 159 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm16546-201ENSMUST00000159442 355 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Mir21b-201ENSMUST00000184317 108 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm44320-201ENSMUST00000199276 86 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm43604-201ENSMUST00000199799 705 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm43028-201ENSMUST00000202561 481 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm18462-201ENSMUST00000208112 417 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm3086-202ENSMUST00000221248 310 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm24152-201ENSMUST00000082764 163 ntBASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim47Q8C0E3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Mir450b-201ENSMUST00000102095 82 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Mir105-201ENSMUST00000104655 80 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm14069-201ENSMUST00000120815 229 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm5396-201ENSMUST00000121222 532 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm22845-201ENSMUST00000157712 104 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm24224-201ENSMUST00000158828 258 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm28830-201ENSMUST00000188192 213 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm36259-201ENSMUST00000197340 392 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm35702-201ENSMUST00000198653 511 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm6240-201ENSMUST00000208014 473 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.82□□□□□ -1.64
Trim47Q8C0E3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm12571-201ENSMUST00000118132 243 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm12926-201ENSMUST00000121158 409 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm23789-201ENSMUST00000122536 301 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm22453-201ENSMUST00000122801 318 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm24650-201ENSMUST00000157105 103 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm26414-201ENSMUST00000157674 269 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm26001-201ENSMUST00000157989 103 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm22611-201ENSMUST00000158288 150 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm25069-201ENSMUST00000175238 86 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm28623-201ENSMUST00000187219 192 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm4644-201ENSMUST00000197587 400 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm43220-201ENSMUST00000199299 282 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm22806-201ENSMUST00000082738 136 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm22353-201ENSMUST00000083918 136 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Gm24449-201ENSMUST00000083985 106 ntBASIC4.81□□□□□ -1.64
Trim47Q8C0E3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms