Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim56Q80VI1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim56Q80VI1 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
Trim56Q80VI1 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm24867-201ENSMUST00000104161 107 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm25875-201ENSMUST00000104323 107 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm23836-201ENSMUST00000104434 129 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Mir1193-201ENSMUST00000116761 121 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm16354-201ENSMUST00000155376 150 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm22561-201ENSMUST00000157331 84 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm23782-201ENSMUST00000157939 120 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Nron-204ENSMUST00000158971 370 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm24976-201ENSMUST00000158972 135 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm10357-201ENSMUST00000159886 264 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm37763-201ENSMUST00000193445 120 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm42578-201ENSMUST00000199960 194 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim56Q80VI1 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Mir21a-201ENSMUST00000083521 92 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim56Q80VI1 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim56Q80VI1 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.49□□□□□ -1.69
Trim56Q80VI1 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm14971-201ENSMUST00000117980 663 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm15377-201ENSMUST00000119594 246 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm26276-201ENSMUST00000157099 109 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm24244-201ENSMUST00000157317 130 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm24552-201ENSMUST00000158646 103 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm18520-201ENSMUST00000174783 658 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Mir6907-201ENSMUST00000183764 71 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm43250-201ENSMUST00000196536 273 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim56Q80VI1 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.48□□□□□ -1.69
Trim56Q80VI1 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm15613-201ENSMUST00000118396 326 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm14119-201ENSMUST00000119511 235 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm26045-201ENSMUST00000157862 97 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm25162-201ENSMUST00000158906 159 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm20399-201ENSMUST00000174652 132 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm45859-201ENSMUST00000212794 214 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.47□□□□□ -1.69
Trim56Q80VI1 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim56Q80VI1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
Trim56Q80VI1 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm25420-201ENSMUST00000104216 127 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm14652-201ENSMUST00000118479 235 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm12417-201ENSMUST00000119153 403 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm13737-201ENSMUST00000119793 232 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm25224-201ENSMUST00000158195 68 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm17159-201ENSMUST00000169043 482 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Mir6336-201ENSMUST00000183581 130 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm37239-201ENSMUST00000193510 141 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm43583-201ENSMUST00000199235 303 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm43600-201ENSMUST00000202134 223 ntBASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim56Q80VI1 Gm45006-201ENSMUST00000206078 690 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms