Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.18□□□□□ -1.74
Trim28Q62318 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Trim28Q62318 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim28Q62318 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim28Q62318 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim28Q62318 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim28Q62318 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim28Q62318 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim28Q62318 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim28Q62318 Gm15195-201ENSMUST00000118775 263 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim28Q62318 Gm26102-201ENSMUST00000157251 284 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm25490-201ENSMUST00000158734 130 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim28Q62318 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim28Q62318 Gm7958-201ENSMUST00000178255 468 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm22259-201ENSMUST00000178926 107 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm26297-201ENSMUST00000179464 132 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm7950-201ENSMUST00000179633 468 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Mir6993-201ENSMUST00000184912 65 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm44322-201ENSMUST00000196830 115 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm34091-201ENSMUST00000200875 604 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm7675-201ENSMUST00000208828 686 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm45317-201ENSMUST00000210385 223 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim28Q62318 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim28Q62318 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim28Q62318 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Trim28Q62318 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim28Q62318 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim28Q62318 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.17□□□□□ -1.74
Trim28Q62318 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim28Q62318 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim28Q62318 Gm12782-201ENSMUST00000117519 727 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm14890-201ENSMUST00000117660 676 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm16017-201ENSMUST00000119834 208 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm13511-201ENSMUST00000121167 363 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm24780-201ENSMUST00000157635 143 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm23380-201ENSMUST00000158448 103 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm25362-201ENSMUST00000158854 105 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm18520-201ENSMUST00000174783 658 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm26960-201ENSMUST00000182263 412 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm28339-201ENSMUST00000185845 696 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm28358-202ENSMUST00000189292 223 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim28Q62318 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim28Q62318 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm21937-201ENSMUST00000222825 218 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 AC130477.2-201ENSMUST00000228158 274 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim28Q62318 Gm10038-201ENSMUST00000077233 441 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.16□□□□□ -1.74
Trim28Q62318 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim28Q62318 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Trim28Q62318 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Trim28Q62318 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.15□□□□□ -1.74
Trim28Q62318 Gm13406-201ENSMUST00000121991 256 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim28Q62318 Mir5099-201ENSMUST00000175257 74 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 Gm44600-201ENSMUST00000208540 111 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim28Q62318 AC144819.1-201ENSMUST00000227015 620 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Trim28Q62318 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.15□□□□□ -1.75
Trim28Q62318 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim28Q62318 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim28Q62318 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Trim28Q62318 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim28Q62318 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Trim28Q62318 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim28Q62318 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim28Q62318 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm23063-201ENSMUST00000102350 93 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim28Q62318 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm22107-201ENSMUST00000122548 100 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm22718-201ENSMUST00000122701 315 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm23167-201ENSMUST00000157155 103 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm27477-201ENSMUST00000184649 143 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm43286-201ENSMUST00000197420 424 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm19126-201ENSMUST00000207896 509 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Trim28Q62318 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm24611-201ENSMUST00000083272 107 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Gm26121-201ENSMUST00000083364 162 ntBASIC4.14□□□□□ -1.75
Trim28Q62318 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim28Q62318 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms