Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23446-201ENSMUST00000177977 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26201-201ENSMUST00000178047 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24711-201ENSMUST00000178062 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24609-201ENSMUST00000178166 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23265-201ENSMUST00000178321 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22812-201ENSMUST00000178329 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26246-201ENSMUST00000178388 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25155-201ENSMUST00000178450 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24760-201ENSMUST00000178530 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22285-201ENSMUST00000178576 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22417-201ENSMUST00000178656 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26270-201ENSMUST00000178690 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23313-201ENSMUST00000178931 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm23089-201ENSMUST00000178947 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm24153-201ENSMUST00000179280 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25597-201ENSMUST00000179388 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25816-201ENSMUST00000179764 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26188-201ENSMUST00000179963 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm26433-201ENSMUST00000180227 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm22128-201ENSMUST00000180346 94 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm28200-201ENSMUST00000187778 315 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29378-201ENSMUST00000188723 315 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm28909-201ENSMUST00000189406 315 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm29192-201ENSMUST00000190942 377 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm31511-201ENSMUST00000193134 657 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm43510-201ENSMUST00000197922 353 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25820-201ENSMUST00000198589 127 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm34701-202ENSMUST00000204685 360 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Gm25409-201ENSMUST00000083764 131 ntBASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav6d-4Q5R1I0 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm14899-201ENSMUST00000118673 548 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm12646-201ENSMUST00000119144 238 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm14238-201ENSMUST00000120227 323 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm14129-201ENSMUST00000122436 291 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm25625-201ENSMUST00000157221 96 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm22769-201ENSMUST00000158367 98 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm25365-201ENSMUST00000158852 121 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm8161-201ENSMUST00000168739 481 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm23933-201ENSMUST00000178405 79 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav6d-4Q5R1I0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm22019-201ENSMUST00000104359 96 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm12640-201ENSMUST00000120097 310 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm24840-201ENSMUST00000122603 147 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm23137-201ENSMUST00000157559 107 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm25412-201ENSMUST00000180258 107 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm20058-201ENSMUST00000186939 284 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Snord43-201ENSMUST00000199549 108 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.01□□□□□ -2.25
Trav6d-4Q5R1I0 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms