Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm36866-201ENSMUST00000193343 657 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm36047-201ENSMUST00000193659 657 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20857-201ENSMUST00000194766 657 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm20858-201ENSMUST00000195459 657 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm37119-201ENSMUST00000195691 389 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm44533-201ENSMUST00000207782 268 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm18000-201ENSMUST00000212153 800 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm19326-201ENSMUST00000219818 326 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Olfr197-201ENSMUST00000080031 926 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm25124-201ENSMUST00000083345 164 ntBASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Upf3bQ3ULL6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm14894-201ENSMUST00000117170 270 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm11785-201ENSMUST00000120165 601 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm28627-201ENSMUST00000186141 453 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm37449-201ENSMUST00000193016 270 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm18658-201ENSMUST00000195558 270 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm43804-201ENSMUST00000198280 456 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm44125-201ENSMUST00000203068 448 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm18488-201ENSMUST00000215082 364 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm22247-201ENSMUST00000082476 131 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 Gm26203-201ENSMUST00000082911 114 ntBASIC2.07□□□□□ -2.08
Upf3bQ3ULL6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm15452-201ENSMUST00000119877 240 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm12044-201ENSMUST00000120335 213 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm22452-201ENSMUST00000122804 104 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm22186-201ENSMUST00000157822 122 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm22666-201ENSMUST00000158717 164 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm16584-201ENSMUST00000159267 189 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm26177-201ENSMUST00000178683 107 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm8532-201ENSMUST00000179174 461 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm23648-201ENSMUST00000180301 107 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm29600-201ENSMUST00000188687 377 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm44938-201ENSMUST00000208614 427 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm45791-201ENSMUST00000212908 352 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm45772-201ENSMUST00000212961 240 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm23506-201ENSMUST00000083077 107 ntBASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Upf3bQ3ULL6 Mir706-201ENSMUST00000102262 84 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm24984-201ENSMUST00000104454 133 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm14931-201ENSMUST00000111079 253 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm22151-201ENSMUST00000116963 58 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm14292-201ENSMUST00000118761 456 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm12096-201ENSMUST00000121149 829 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Trav20-201ENSMUST00000142754 347 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm22611-201ENSMUST00000158288 150 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm24878-201ENSMUST00000158782 104 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Mir5101-201ENSMUST00000175181 83 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm25194-201ENSMUST00000177987 79 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm43007-201ENSMUST00000197618 291 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Mir7118-201ENSMUST00000197760 61 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm44324-201ENSMUST00000198517 135 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm43026-201ENSMUST00000202972 325 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm5317-201ENSMUST00000204445 847 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm19709-201ENSMUST00000215403 482 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm9068-201ENSMUST00000217393 455 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm22265-201ENSMUST00000082947 116 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Mir93-201ENSMUST00000083593 88 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Upf3bQ3ULL6 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Mir669d-201ENSMUST00000104644 121 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm14359-201ENSMUST00000118883 424 ntBASIC2.04□□□□□ -2.08
Upf3bQ3ULL6 Gm14360-201ENSMUST00000120670 393 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms