Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC4.16□□□□□ -1.74
Rnf180Q3U827 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.16□□□□□ -1.74
Rnf180Q3U827 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.16□□□□□ -1.74
Rnf180Q3U827 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.16□□□□□ -1.74
Rnf180Q3U827 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Rnf180Q3U827 Gm23412-201ENSMUST00000083017 107 ntBASIC4.16□□□□□ -1.74
Rnf180Q3U827 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Rnf180Q3U827 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Rnf180Q3U827 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Rnf180Q3U827 Gm13329-201ENSMUST00000117063 265 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm12191-201ENSMUST00000118307 348 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm9703-201ENSMUST00000119573 343 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm15106-201ENSMUST00000119691 821 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm13518-201ENSMUST00000120018 233 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm12924-201ENSMUST00000121747 318 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm22322-201ENSMUST00000157151 111 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm25283-201ENSMUST00000157272 77 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm22038-201ENSMUST00000157277 242 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm23779-201ENSMUST00000157938 64 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm25456-201ENSMUST00000157952 109 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm24191-201ENSMUST00000157977 122 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm17072-201ENSMUST00000166673 658 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm18520-201ENSMUST00000174783 658 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.15□□□□□ -1.75
Rnf180Q3U827 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 n-R5s40-201ENSMUST00000082475 124 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm10343-201ENSMUST00000096279 348 ntBASIC4.15□□□□□ -1.75
Rnf180Q3U827 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Rnf180Q3U827 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Rnf180Q3U827 Gm44164-201ENSMUST00000203605 2561 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm22782-201ENSMUST00000104082 132 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm14518-201ENSMUST00000117351 542 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm14013-201ENSMUST00000119006 270 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm13717-201ENSMUST00000119868 365 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm24059-201ENSMUST00000157493 312 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm22843-201ENSMUST00000157710 134 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm22257-201ENSMUST00000158687 301 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm4468-201ENSMUST00000170206 294 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm3370-201ENSMUST00000171785 500 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Mir6383-201ENSMUST00000184545 116 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm25820-201ENSMUST00000198589 127 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Mir3970-201ENSMUST00000199287 90 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm33654-201ENSMUST00000221704 215 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm21937-201ENSMUST00000222825 218 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm23406-201ENSMUST00000082537 122 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm25207-201ENSMUST00000093745 107 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.14□□□□□ -1.75
Rnf180Q3U827 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Rnf180Q3U827 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnf180Q3U827 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm23060-201ENSMUST00000102345 109 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm25943-201ENSMUST00000103791 90 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm15760-201ENSMUST00000119553 283 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm11456-201ENSMUST00000121070 256 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm16358-201ENSMUST00000146046 210 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm5958-201ENSMUST00000147698 297 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm22034-201ENSMUST00000157283 134 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm25360-201ENSMUST00000178786 191 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm25285-201ENSMUST00000178951 90 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Gm22263-201ENSMUST00000180060 104 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mir21a-201ENSMUST00000083521 92 ntBASIC4.13□□□□□ -1.75
Rnf180Q3U827 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Rnf180Q3U827 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.13□□□□□ -1.75
Rnf180Q3U827 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Rnf180Q3U827 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.12□□□□□ -1.75
Rnf180Q3U827 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Rnf180Q3U827 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms