Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm25152-201ENSMUST00000157117 114 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm22665-201ENSMUST00000158720 275 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm5876-201ENSMUST00000203735 243 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf40Q3U319 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Mir215-201ENSMUST00000083628 112 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf40Q3U319 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.95□□□□□ -1.62
Rnf40Q3U319 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf40Q3U319 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Mir767-201ENSMUST00000103256 107 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm9157-201ENSMUST00000117673 225 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm23713-201ENSMUST00000157353 70 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm23993-201ENSMUST00000157478 144 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm22316-201ENSMUST00000158012 216 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm22724-201ENSMUST00000158091 127 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm22615-201ENSMUST00000158102 70 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm22075-201ENSMUST00000158599 192 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm24877-201ENSMUST00000158779 116 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Mir3110-201ENSMUST00000175053 80 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm9687-201ENSMUST00000189312 602 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm7449-201ENSMUST00000194393 663 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm38088-201ENSMUST00000195829 241 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm45215-201ENSMUST00000206407 395 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm35405-201ENSMUST00000218754 400 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm40692-201ENSMUST00000220411 491 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.94□□□□□ -1.62
Rnf40Q3U319 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm22004-201ENSMUST00000101884 107 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm10552-201ENSMUST00000113396 372 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm14521-201ENSMUST00000119545 350 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm14593-201ENSMUST00000119948 294 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm13443-201ENSMUST00000120770 555 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm22514-201ENSMUST00000122547 308 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm22343-201ENSMUST00000122648 286 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm26347-201ENSMUST00000157526 131 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm25447-201ENSMUST00000158997 128 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm4714-201ENSMUST00000203395 279 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 n-R5s62-201ENSMUST00000082780 96 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Mir133b-201ENSMUST00000083546 119 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.93□□□□□ -1.62
Rnf40Q3U319 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf40Q3U319 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25980-201ENSMUST00000157176 218 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25098-201ENSMUST00000177580 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm23356-201ENSMUST00000177610 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24027-201ENSMUST00000177611 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22511-201ENSMUST00000177628 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22630-201ENSMUST00000177781 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm23560-201ENSMUST00000177782 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25462-201ENSMUST00000177833 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm26059-201ENSMUST00000177865 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22255-201ENSMUST00000177933 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25146-201ENSMUST00000177976 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25523-201ENSMUST00000178044 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24585-201ENSMUST00000178104 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22627-201ENSMUST00000178127 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22912-201ENSMUST00000178242 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm24866-201ENSMUST00000178338 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm22524-201ENSMUST00000178357 79 ntBASIC4.92□□□□□ -1.62
Rnf40Q3U319 Gm25710-201ENSMUST00000178367 79 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms