Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim43aQ3TL54 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim43aQ3TL54 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trim43aQ3TL54 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm14292-201ENSMUST00000118761 456 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm14815-201ENSMUST00000120060 488 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm26275-201ENSMUST00000157101 268 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm22803-201ENSMUST00000158049 283 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm27443-201ENSMUST00000184660 98 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm42958-201ENSMUST00000197595 318 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm43708-201ENSMUST00000198857 961 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.02□□□□□ -2.09
Trim43aQ3TL54 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm25124-201ENSMUST00000083345 164 ntBASIC2.02□□□□□ -2.09
Trim43aQ3TL54 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm13439-201ENSMUST00000117541 409 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm15215-201ENSMUST00000117773 489 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm2003-201ENSMUST00000118537 636 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm15497-201ENSMUST00000119137 551 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 U6.1-201ENSMUST00000157443 101 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm25658-201ENSMUST00000158472 128 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm24656-201ENSMUST00000177548 132 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm7871-201ENSMUST00000195346 618 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm43512-201ENSMUST00000198495 176 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm9318-201ENSMUST00000222444 438 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.01□□□□□ -2.09
Trim43aQ3TL54 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm15067-201ENSMUST00000119534 156 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm15223-201ENSMUST00000120989 826 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm14694-201ENSMUST00000121856 282 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm23885-201ENSMUST00000122682 294 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm16328-201ENSMUST00000126985 196 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Trav20-201ENSMUST00000142754 347 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm5900-201ENSMUST00000179862 375 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Mir6379-201ENSMUST00000183392 115 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm28755-201ENSMUST00000185773 199 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm28163-201ENSMUST00000187099 325 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm43582-201ENSMUST00000196149 343 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Mir7021-201ENSMUST00000197026 63 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm43865-201ENSMUST00000204721 127 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm45386-201ENSMUST00000210194 218 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm35558-202ENSMUST00000221819 499 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm26055-201ENSMUST00000083038 107 ntBASIC2□□□□□ -2.09
Trim43aQ3TL54 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trim43aQ3TL54 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm14931-201ENSMUST00000111079 253 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm13331-201ENSMUST00000117500 448 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm12507-201ENSMUST00000119155 415 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm25961-201ENSMUST00000157174 135 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm25051-201ENSMUST00000158602 249 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm7258-201ENSMUST00000179317 300 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Mir7009-201ENSMUST00000184519 64 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Mir8106-201ENSMUST00000184520 139 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm37550-201ENSMUST00000193230 463 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm37993-201ENSMUST00000195301 988 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm44391-201ENSMUST00000198490 93 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm34701-202ENSMUST00000204685 360 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Gm23650-201ENSMUST00000083355 70 ntBASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trim43aQ3TL54 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trim43aQ3TL54 Mir706-201ENSMUST00000102262 84 ntBASIC1.98□□□□□ -2.09
Trim43aQ3TL54 Gm24907-201ENSMUST00000116932 128 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms