Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm12509-201ENSMUST00000118033 609 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm15211-201ENSMUST00000118932 528 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm11849-201ENSMUST00000121293 261 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm24914-201ENSMUST00000157285 313 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm23258-201ENSMUST00000158319 106 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm24577-201ENSMUST00000158580 63 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm10075-201ENSMUST00000162030 545 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm17183-201ENSMUST00000171170 493 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm24818-201ENSMUST00000175093 161 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm26622-201ENSMUST00000180520 298 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Mir6393-201ENSMUST00000183709 94 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29512-201ENSMUST00000185544 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28110-201ENSMUST00000185782 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28838-201ENSMUST00000186338 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29057-201ENSMUST00000186468 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29661-201ENSMUST00000186781 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28737-201ENSMUST00000186808 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29118-201ENSMUST00000186908 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28433-201ENSMUST00000187085 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29635-201ENSMUST00000187221 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28759-201ENSMUST00000187621 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28831-201ENSMUST00000187739 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28200-201ENSMUST00000187778 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29026-201ENSMUST00000187787 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28752-201ENSMUST00000188340 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28797-201ENSMUST00000188543 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28855-201ENSMUST00000188680 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29378-201ENSMUST00000188723 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28569-201ENSMUST00000188748 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28120-201ENSMUST00000188812 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28369-201ENSMUST00000188993 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29037-201ENSMUST00000189092 313 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28909-201ENSMUST00000189406 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28705-201ENSMUST00000189548 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28861-201ENSMUST00000189681 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29180-201ENSMUST00000190003 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28939-201ENSMUST00000190351 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm28223-201ENSMUST00000190469 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29575-201ENSMUST00000190597 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29092-201ENSMUST00000190768 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm29469-201ENSMUST00000191448 315 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm42672-201ENSMUST00000197821 352 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm45704-201ENSMUST00000212582 403 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm2710-201ENSMUST00000073196 603 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm23678-201ENSMUST00000083157 107 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm23461-201ENSMUST00000083265 107 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm37674-201ENSMUST00000194177 1834 ntBASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col28a1Q2UY11 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm12982-201ENSMUST00000117408 190 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm15215-201ENSMUST00000117773 489 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm7327-201ENSMUST00000120925 652 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm11430-201ENSMUST00000121317 217 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm12412-201ENSMUST00000121867 328 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm25860-201ENSMUST00000158252 126 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm8292-201ENSMUST00000162574 396 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm4761-201ENSMUST00000178086 582 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm9830-201ENSMUST00000178509 357 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm24968-201ENSMUST00000179817 107 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm19498-201ENSMUST00000191128 331 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm45119-201ENSMUST00000207612 199 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm9712-201ENSMUST00000210842 311 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm21937-201ENSMUST00000222825 218 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 AF357428-201ENSMUST00000083815 69 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm5670-201ENSMUST00000093546 372 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 BC051076-202ENSMUST00000199477 2868 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col28a1Q2UY11 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Col28a1Q2UY11 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms