Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col9a1Q05722 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col9a1Q05722 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col9a1Q05722 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col9a1Q05722 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.9□□□□□ -1.63
Col9a1Q05722 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col9a1Q05722 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col9a1Q05722 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm26135-201ENSMUST00000101993 72 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm25419-201ENSMUST00000104215 191 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm24232-201ENSMUST00000104314 132 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm23772-201ENSMUST00000104433 102 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 n-R5s201-201ENSMUST00000122622 116 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm24716-201ENSMUST00000157524 104 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm23554-201ENSMUST00000157818 110 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm22536-201ENSMUST00000158171 134 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Snord50b-201ENSMUST00000178497 72 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm34139-201ENSMUST00000196166 294 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm22299-201ENSMUST00000082663 136 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Mir186-201ENSMUST00000083497 71 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col9a1Q05722 Gm42862-201ENSMUST00000197494 2621 ntBASIC4.89□□□□□ -1.63
Col9a1Q05722 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm43361-201ENSMUST00000196562 4690 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col9a1Q05722 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm22983-201ENSMUST00000158308 104 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm23816-201ENSMUST00000179617 132 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm6802-202ENSMUST00000186566 126 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm5285-201ENSMUST00000193089 666 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm3829-201ENSMUST00000222362 619 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm22248-201ENSMUST00000082482 150 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Gm25797-201ENSMUST00000082640 107 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Snord14d-201ENSMUST00000083424 86 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.88□□□□□ -1.63
Col9a1Q05722 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Col9a1Q05722 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col9a1Q05722 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col9a1Q05722 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 AC120375.1-201ENSMUST00000227034 3612 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm12335-201ENSMUST00000119738 327 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm24440-201ENSMUST00000157236 63 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm24512-201ENSMUST00000174963 65 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm26828-201ENSMUST00000180640 172 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm44214-201ENSMUST00000204153 606 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Snora52-201ENSMUST00000082732 137 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm23244-201ENSMUST00000083375 92 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm22055-201ENSMUST00000083388 107 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm15314-201ENSMUST00000120740 1887 ntBASIC4.87□□□□□ -1.63
Col9a1Q05722 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col9a1Q05722 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col9a1Q05722 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col9a1Q05722 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Col9a1Q05722 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms