Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Mir7679-201ENSMUST00000183379 63 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm27869-201ENSMUST00000184327 122 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Mir7678-201ENSMUST00000185076 71 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm28779-201ENSMUST00000189678 323 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm18341-201ENSMUST00000197538 622 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm3724-201ENSMUST00000197957 349 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm44125-201ENSMUST00000203068 448 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm18414-201ENSMUST00000210858 694 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm45439-201ENSMUST00000211723 359 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm46136-201ENSMUST00000214730 565 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 AC122924.2-201ENSMUST00000220799 298 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm25402-201ENSMUST00000082966 131 ntBASIC1.64□□□□□ -2.15
Nkx3-1P97436 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Nkx3-1P97436 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm22494-201ENSMUST00000104495 128 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm14823-201ENSMUST00000117698 238 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm13432-201ENSMUST00000118861 241 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm14713-201ENSMUST00000122362 686 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm22560-201ENSMUST00000157332 120 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm24478-201ENSMUST00000157439 158 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm22556-201ENSMUST00000157803 100 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm24770-201ENSMUST00000158505 92 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm23648-201ENSMUST00000180301 107 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm27979-201ENSMUST00000185126 56 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm28412-201ENSMUST00000187243 177 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm28917-201ENSMUST00000187294 237 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm29641-201ENSMUST00000188955 259 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm28766-201ENSMUST00000191086 234 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm19147-201ENSMUST00000199622 652 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm7984-201ENSMUST00000060640 538 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm23506-201ENSMUST00000083077 107 ntBASIC1.63□□□□□ -2.15
Nkx3-1P97436 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Nkx3-1P97436 Mir466n-201ENSMUST00000104798 94 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm11784-201ENSMUST00000118568 474 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm11935-201ENSMUST00000118608 399 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm11556-201ENSMUST00000120751 288 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm11430-201ENSMUST00000121317 217 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm25283-201ENSMUST00000157272 77 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm22765-201ENSMUST00000158371 128 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Mir5129-201ENSMUST00000174938 78 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm25874-201ENSMUST00000178030 79 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm24638-201ENSMUST00000179807 132 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm28688-201ENSMUST00000187301 268 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm19202-201ENSMUST00000198096 808 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm19457-201ENSMUST00000200995 448 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm9068-201ENSMUST00000217393 455 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Gm19118-201ENSMUST00000222554 98 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.62□□□□□ -2.15
Nkx3-1P97436 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Nkx3-1P97436 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Mir301b-201ENSMUST00000102333 97 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm24126-201ENSMUST00000104111 106 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm15110-201ENSMUST00000117545 881 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm13085-201ENSMUST00000118356 171 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm4732-201ENSMUST00000118778 473 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm14748-201ENSMUST00000119819 411 ntBASIC1.61□□□□□ -2.15
Nkx3-1P97436 Gm5646-201ENSMUST00000120568 714 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms