Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm31511-201ENSMUST00000193134 657 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm30638-201ENSMUST00000195570 656 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm36728-201ENSMUST00000195782 665 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.95□□□□□ -1.94
NcanP55066 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.95□□□□□ -1.94
NcanP55066 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm43239-201ENSMUST00000200131 201 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.95□□□□□ -1.94
NcanP55066 Gm18113-201ENSMUST00000220630 303 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.95□□□□□ -1.94
NcanP55066 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.95□□□□□ -1.94
NcanP55066 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NcanP55066 Gm23140-201ENSMUST00000082487 107 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm26055-201ENSMUST00000083038 107 ntBASIC2.95□□□□□ -1.94
NcanP55066 Gm23097-201ENSMUST00000083448 105 ntBASIC2.95□□□□□ -1.94
NcanP55066 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
NcanP55066 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NcanP55066 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NcanP55066 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.94□□□□□ -1.94
NcanP55066 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Gm11221-201ENSMUST00000117230 597 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm14657-201ENSMUST00000117461 302 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm11285-201ENSMUST00000118443 322 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm11784-201ENSMUST00000118568 474 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm15443-201ENSMUST00000118947 820 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm15162-201ENSMUST00000119325 283 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm11420-201ENSMUST00000120047 402 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.94□□□□□ -1.94
NcanP55066 Gm24291-201ENSMUST00000157633 162 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm23186-201ENSMUST00000180078 107 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm26914-201ENSMUST00000182262 223 ntBASIC2.94□□□□□ -1.94
NcanP55066 Mir6338-201ENSMUST00000183389 109 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm17946-201ENSMUST00000186856 538 ntBASIC2.94□□□□□ -1.94
NcanP55066 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Gm42622-201ENSMUST00000197229 355 ntBASIC2.94□□□□□ -1.94
NcanP55066 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm43264-201ENSMUST00000202284 325 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.94□□□□□ -1.94
NcanP55066 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.94□□□□□ -1.94
NcanP55066 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Mir21a-201ENSMUST00000083521 92 ntBASIC2.94□□□□□ -1.94
NcanP55066 Gm5670-201ENSMUST00000093546 372 ntBASIC2.94□□□□□ -1.94
NcanP55066 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NcanP55066 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NcanP55066 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
NcanP55066 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NcanP55066 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NcanP55066 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NcanP55066 Gm8217-201ENSMUST00000119136 465 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm12213-201ENSMUST00000119924 353 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm25621-201ENSMUST00000157223 114 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm24901-201ENSMUST00000158125 110 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm22521-201ENSMUST00000158272 134 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm17538-201ENSMUST00000168236 327 ntBASIC2.93□□□□□ -1.94
NcanP55066 Snord93-201ENSMUST00000175580 71 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm27660-201ENSMUST00000184028 208 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Gm29192-201ENSMUST00000190942 377 ntBASIC2.93□□□□□ -1.94
NcanP55066 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Gm19089-201ENSMUST00000197207 613 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm43427-201ENSMUST00000198188 331 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm43431-201ENSMUST00000198577 340 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm43708-201ENSMUST00000198857 961 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm44910-201ENSMUST00000208451 396 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm45387-201ENSMUST00000209792 632 ntBASIC2.93□□□□□ -1.94
NcanP55066 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.93□□□□□ -1.94
NcanP55066 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.93□□□□□ -1.94
NcanP55066 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Snord38a-201ENSMUST00000083746 71 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.93□□□□□ -1.94
NcanP55066 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.93□□□□□ -1.94
NcanP55066 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NcanP55066 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NcanP55066 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NcanP55066 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NcanP55066 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NcanP55066 Gm25496-201ENSMUST00000104430 120 ntBASIC2.92□□□□□ -1.94
NcanP55066 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NcanP55066 Gm7123-201ENSMUST00000117647 213 ntBASIC2.92□□□□□ -1.94
NcanP55066 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.92□□□□□ -1.94
NcanP55066 Gm6568-201ENSMUST00000122274 697 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm24288-201ENSMUST00000157630 144 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm25163-201ENSMUST00000158905 104 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm17162-201ENSMUST00000168538 473 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm26195-201ENSMUST00000175035 101 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NcanP55066 Gm25361-201ENSMUST00000179358 76 ntBASIC2.92□□□□□ -1.94
NcanP55066 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 177.6 ms