Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm26147-201ENSMUST00000104479 114 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm11221-201ENSMUST00000117230 597 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm15175-201ENSMUST00000117629 132 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Traf1P39428 Gm6568-201ENSMUST00000122274 697 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm15878-201ENSMUST00000127561 306 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.06□□□□□ -1.92
Traf1P39428 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.06□□□□□ -1.92
Traf1P39428 Gm23068-201ENSMUST00000158239 293 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Mir3076-201ENSMUST00000175415 60 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm20660-201ENSMUST00000177515 289 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm27608-201ENSMUST00000184822 162 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm19257-201ENSMUST00000186121 183 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.06□□□□□ -1.92
Traf1P39428 Gm6615-201ENSMUST00000199426 631 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Traf1P39428 Gm44555-201ENSMUST00000209008 148 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Traf1P39428 Gm18346-201ENSMUST00000216782 325 ntBASIC3.06□□□□□ -1.92
Traf1P39428 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.06□□□□□ -1.92
Traf1P39428 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.06□□□□□ -1.92
Traf1P39428 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.06□□□□□ -1.92
Traf1P39428 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.06□□□□□ -1.92
Traf1P39428 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm24280-201ENSMUST00000104237 134 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm25876-201ENSMUST00000104329 119 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm12096-201ENSMUST00000121149 829 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm14629-201ENSMUST00000122428 144 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm26414-201ENSMUST00000157674 269 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm22076-201ENSMUST00000158601 84 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm23476-201ENSMUST00000158881 274 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Snord53-201ENSMUST00000175146 78 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm22633-201ENSMUST00000179834 107 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm29184-201ENSMUST00000190038 334 ntBASIC3.05□□□□□ -1.92
Traf1P39428 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.05□□□□□ -1.92
Traf1P39428 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.05□□□□□ -1.92
Traf1P39428 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.05□□□□□ -1.92
Traf1P39428 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm25199-201ENSMUST00000083095 104 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm23847-201ENSMUST00000083829 110 ntBASIC3.05□□□□□ -1.92
Traf1P39428 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Traf1P39428 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Traf1P39428 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.05□□□□□ -1.92
Traf1P39428 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Traf1P39428 Gm11285-201ENSMUST00000118443 322 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm6574-201ENSMUST00000120037 362 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm11556-201ENSMUST00000120751 288 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.04□□□□□ -1.92
Traf1P39428 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm27755-201ENSMUST00000184623 132 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm28900-201ENSMUST00000185232 156 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm29516-201ENSMUST00000190402 468 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.04□□□□□ -1.92
Traf1P39428 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm45522-201ENSMUST00000210784 166 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Traf1P39428 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.04□□□□□ -1.92
Traf1P39428 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Traf1P39428 Gm26446-201ENSMUST00000082455 103 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Gm22154-201ENSMUST00000083844 131 ntBASIC3.04□□□□□ -1.92
Traf1P39428 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Traf1P39428 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Traf1P39428 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Traf1P39428 Gm13368-201ENSMUST00000122443 430 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm24681-201ENSMUST00000158760 107 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.03□□□□□ -1.92
Traf1P39428 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Traf1P39428 Gm23933-201ENSMUST00000178405 79 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm23190-201ENSMUST00000180307 64 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Gm44923-201ENSMUST00000206673 85 ntBASIC3.03□□□□□ -1.92
Traf1P39428 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.03□□□□□ -1.92
Traf1P39428 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.03□□□□□ -1.92
Traf1P39428 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 196.5 ms