Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC168266.1-201ENSMUST00000216024 226 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.93□□□□□ -2.1
Sdc1P18828 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 AL590503.1-201ENSMUST00000222053 321 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.93□□□□□ -2.1
Sdc1P18828 Snord14d-201ENSMUST00000083424 86 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 Olfr575-201ENSMUST00000084812 957 ntBASIC1.93□□□□□ -2.1
Sdc1P18828 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Sdc1P18828 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Sdc1P18828 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Sdc1P18828 Gm22488-201ENSMUST00000116811 127 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm14932-201ENSMUST00000117112 453 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm14558-201ENSMUST00000117458 381 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm12721-201ENSMUST00000120621 268 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm23206-201ENSMUST00000122720 184 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm22236-201ENSMUST00000157093 106 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm24846-201ENSMUST00000158033 108 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm24768-201ENSMUST00000158512 94 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc1P18828 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc1P18828 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm37946-201ENSMUST00000192064 347 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm6140-201ENSMUST00000192494 966 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm8023-201ENSMUST00000195298 903 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm6059-201ENSMUST00000196903 340 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm43708-201ENSMUST00000198857 961 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm43932-201ENSMUST00000204499 52 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm44519-201ENSMUST00000206486 122 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Gm44818-201ENSMUST00000206608 358 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc1P18828 Mir93-201ENSMUST00000083593 88 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Sdc1P18828 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.92□□□□□ -2.1
Sdc1P18828 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Sdc1P18828 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Sdc1P18828 Gm26377-201ENSMUST00000102184 108 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Sdc1P18828 Mir1192-201ENSMUST00000116976 121 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm14670-201ENSMUST00000117327 337 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm14049-201ENSMUST00000121009 636 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm11849-201ENSMUST00000121293 261 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm23111-201ENSMUST00000122652 105 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.91□□□□□ -2.1
Sdc1P18828 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.91□□□□□ -2.1
Sdc1P18828 Gm25280-201ENSMUST00000157269 101 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm25910-201ENSMUST00000157620 140 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm25706-201ENSMUST00000157828 247 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm23068-201ENSMUST00000158239 293 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm16326-201ENSMUST00000162843 414 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm21673-201ENSMUST00000186640 436 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm21135-201ENSMUST00000189023 436 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Trbv24-201ENSMUST00000194614 347 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Igkv8-31-201ENSMUST00000200040 372 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm45513-201ENSMUST00000210228 376 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm45240-201ENSMUST00000211437 674 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm6109-201ENSMUST00000223297 348 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.91□□□□□ -2.1
Sdc1P18828 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Sdc1P18828 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Sdc1P18828 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm14007-201ENSMUST00000118288 210 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm4732-201ENSMUST00000118778 473 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm7071-201ENSMUST00000120458 462 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm12819-201ENSMUST00000122223 629 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm21894-201ENSMUST00000179631 546 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm27028-201ENSMUST00000182303 399 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Mir6408-201ENSMUST00000183643 91 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm7039-201ENSMUST00000205138 346 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm44594-201ENSMUST00000208982 407 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm26446-201ENSMUST00000082455 103 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gm23454-201ENSMUST00000083332 133 ntBASIC1.9□□□□□ -2.11
Sdc1P18828 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Sdc1P18828 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
Sdc1P18828 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm12550-201ENSMUST00000118478 329 ntBASIC1.89□□□□□ -2.11
Sdc1P18828 Gm15659-201ENSMUST00000118881 341 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms