Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Cdx1P18111 AC115289.1-201ENSMUST00000224915 522 ntBASIC1.97□□□□□ -2.09
Cdx1P18111 Gm22622-201ENSMUST00000082870 129 ntBASIC1.97□□□□□ -2.09
Cdx1P18111 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Cdx1P18111 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Cdx1P18111 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Cdx1P18111 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.97□□□□□ -2.09
Cdx1P18111 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm22543-201ENSMUST00000104347 94 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Gm12235-201ENSMUST00000118596 170 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm26414-201ENSMUST00000157674 269 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Gm4468-201ENSMUST00000170206 294 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Cdx1P18111 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm9318-201ENSMUST00000222444 438 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Cdx1P18111 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm23040-201ENSMUST00000083869 163 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.96□□□□□ -2.1
Cdx1P18111 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
Cdx1P18111 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Cdx1P18111 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Cdx1P18111 Gm7164-201ENSMUST00000117503 450 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm13355-201ENSMUST00000117996 317 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm12656-201ENSMUST00000118149 577 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm15312-201ENSMUST00000118827 271 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm23885-201ENSMUST00000122682 294 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm22666-201ENSMUST00000158717 164 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Mir3075-201ENSMUST00000175340 85 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Mir5118-201ENSMUST00000175551 67 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm29335-201ENSMUST00000188361 459 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm3489-201ENSMUST00000190083 528 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Trbv18-201ENSMUST00000194256 294 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm37807-201ENSMUST00000194310 190 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm43652-201ENSMUST00000196219 675 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm44050-201ENSMUST00000204263 527 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Gm45240-201ENSMUST00000211437 674 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.95□□□□□ -2.1
Cdx1P18111 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Cdx1P18111 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Cdx1P18111 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Cdx1P18111 Gm5670-201ENSMUST00000093546 372 ntBASIC1.95□□□□□ -2.1
Cdx1P18111 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Cdx1P18111 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cdx1P18111 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm22779-201ENSMUST00000104085 107 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Cdx1P18111 Mir466k-201ENSMUST00000116774 122 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm11935-201ENSMUST00000118608 399 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm14359-201ENSMUST00000118883 424 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm12646-201ENSMUST00000119144 238 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm14360-201ENSMUST00000120670 393 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm9498-201ENSMUST00000140849 291 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm14368-201ENSMUST00000145305 415 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm24846-201ENSMUST00000158033 108 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm16232-201ENSMUST00000162856 167 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.94□□□□□ -2.1
Cdx1P18111 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm19694-201ENSMUST00000192364 505 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm38238-201ENSMUST00000194334 346 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm3724-201ENSMUST00000197957 349 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm44024-201ENSMUST00000203008 476 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm44794-201ENSMUST00000206550 411 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm6796-201ENSMUST00000211919 243 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm24313-201ENSMUST00000082561 133 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Mir30d-201ENSMUST00000083503 82 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Gm22353-201ENSMUST00000083918 136 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Cdx1P18111 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cdx1P18111 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.94□□□□□ -2.1
Cdx1P18111 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Cdx1P18111 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.93□□□□□ -2.1
Cdx1P18111 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Cdx1P18111 Gm15183-201ENSMUST00000118933 348 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm12044-201ENSMUST00000120335 213 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm14428-201ENSMUST00000120408 822 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm12872-201ENSMUST00000121835 320 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Cdx1P18111 Gm26280-201ENSMUST00000157096 101 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm25339-201ENSMUST00000157458 232 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm24601-201ENSMUST00000157970 143 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm17377-201ENSMUST00000165184 207 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Mir3964-201ENSMUST00000174898 74 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm18416-201ENSMUST00000175635 1003 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm24713-201ENSMUST00000178850 107 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm25448-201ENSMUST00000180065 107 ntBASIC1.93□□□□□ -2.1
Cdx1P18111 Gm27245-201ENSMUST00000184385 376 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms