Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Hoxd3P09027 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Hoxd3P09027 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm22778-201ENSMUST00000104090 128 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm14626-201ENSMUST00000117619 216 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm12719-201ENSMUST00000118859 241 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm5762-201ENSMUST00000119204 258 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm2830-201ENSMUST00000140330 385 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm25889-201ENSMUST00000157775 107 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm22314-201ENSMUST00000158007 281 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm22726-201ENSMUST00000158089 179 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm28000-201ENSMUST00000184380 85 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm44402-201ENSMUST00000203677 238 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm44425-201ENSMUST00000203739 429 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm44259-201ENSMUST00000204996 298 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm44816-201ENSMUST00000206666 477 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 AC131720.3-201ENSMUST00000219113 275 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Hoxd3P09027 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.75□□□□□ -1.81
Hoxd3P09027 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm37562-201ENSMUST00000194763 4328 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm22779-201ENSMUST00000104085 107 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm22051-201ENSMUST00000117002 127 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm22514-201ENSMUST00000122547 308 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm24371-201ENSMUST00000122662 267 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm25606-201ENSMUST00000158363 95 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm29167-201ENSMUST00000190024 377 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm24355-201ENSMUST00000082858 122 ntBASIC3.74□□□□□ -1.81
Hoxd3P09027 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Hoxd3P09027 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Hoxd3P09027 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm38020-201ENSMUST00000193066 4676 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd3P09027 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm12449-201ENSMUST00000117572 234 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm14878-201ENSMUST00000118167 293 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm13132-201ENSMUST00000121194 472 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm26098-201ENSMUST00000157247 288 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm26828-201ENSMUST00000180640 172 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Mir7031-201ENSMUST00000183860 65 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm28314-201ENSMUST00000191276 345 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd3P09027 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.73□□□□□ -1.81
Hoxd3P09027 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd3P09027 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Hoxd3P09027 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC3.73□□□□□ -1.81
Hoxd3P09027 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Hoxd3P09027 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms