Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.77□□□□□ -2.13
Col5a1O88207 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col5a1O88207 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col5a1O88207 CT009510.2-203ENSMUST00000226704 2136 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm25213-201ENSMUST00000102388 113 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm24430-201ENSMUST00000104077 104 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm14577-201ENSMUST00000121134 256 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm22107-201ENSMUST00000122548 100 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm25052-201ENSMUST00000122661 158 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm22083-201ENSMUST00000157586 102 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm24498-201ENSMUST00000158445 102 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm17054-201ENSMUST00000169811 259 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm17153-201ENSMUST00000171314 490 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Mir3112-201ENSMUST00000175431 82 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Mir7016-201ENSMUST00000184308 72 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm29658-201ENSMUST00000185404 230 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col5a1O88207 Gm37771-201ENSMUST00000193121 265 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm43556-201ENSMUST00000196186 681 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm43171-201ENSMUST00000199882 291 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.76□□□□□ -2.13
Col5a1O88207 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col5a1O88207 Mir448-201ENSMUST00000083516 112 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Gm22829-201ENSMUST00000083771 106 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Col5a1O88207 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col5a1O88207 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.76□□□□□ -2.13
Col5a1O88207 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col5a1O88207 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.76□□□□□ -2.13
Col5a1O88207 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm25560-201ENSMUST00000104606 176 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm15113-201ENSMUST00000119280 836 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm12432-201ENSMUST00000119540 186 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm25945-201ENSMUST00000122484 135 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm17065-201ENSMUST00000165245 239 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm18396-201ENSMUST00000177095 361 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm27753-201ENSMUST00000184742 203 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm37979-201ENSMUST00000193065 712 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC069561.3-201ENSMUST00000217321 114 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC239878.1-201ENSMUST00000224212 506 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 AC154511.1-201ENSMUST00000222578 1587 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
Col5a1O88207 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm19335-201ENSMUST00000195836 2069 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm22761-201ENSMUST00000102278 96 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm11268-201ENSMUST00000118347 267 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm7429-201ENSMUST00000118664 348 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm14651-201ENSMUST00000147192 442 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm3111-201ENSMUST00000167426 490 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Mir6985-201ENSMUST00000184641 61 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Mir7665-201ENSMUST00000184907 63 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Mir496b-201ENSMUST00000184935 113 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm27544-201ENSMUST00000185069 155 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm29299-201ENSMUST00000185609 923 ntBASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col5a1O88207 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms