Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Pcdh1F7BJK1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm26367-201ENSMUST00000104165 132 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm24469-201ENSMUST00000104487 131 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm22984-201ENSMUST00000122751 122 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm22453-201ENSMUST00000122801 318 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm25665-201ENSMUST00000157695 110 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm23350-201ENSMUST00000158429 103 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm24976-201ENSMUST00000158972 135 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm2962-201ENSMUST00000159266 336 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm10075-201ENSMUST00000162030 545 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm27421-201ENSMUST00000184729 167 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Mir6715-201ENSMUST00000184990 57 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm38088-201ENSMUST00000195829 241 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm18921-201ENSMUST00000221798 366 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Mir32-201ENSMUST00000083610 70 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm23042-201ENSMUST00000083866 101 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.65□□□□□ -1.83
Pcdh1F7BJK1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm6574-201ENSMUST00000120037 362 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm14551-201ENSMUST00000120802 256 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm13345-201ENSMUST00000121928 228 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm16354-201ENSMUST00000155376 150 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm25908-201ENSMUST00000157624 98 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm22654-201ENSMUST00000157874 105 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Mir1947-201ENSMUST00000158235 85 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm25605-201ENSMUST00000158364 124 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm26287-201ENSMUST00000158887 81 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm26460-201ENSMUST00000175061 126 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm20651-201ENSMUST00000177219 329 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm13249-201ENSMUST00000177803 345 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm21893-201ENSMUST00000179119 397 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm13144-201ENSMUST00000179385 345 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm26928-201ENSMUST00000182674 572 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm28755-201ENSMUST00000185773 199 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm44010-201ENSMUST00000204432 331 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm45860-201ENSMUST00000212700 334 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pcdh1F7BJK1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm24318-201ENSMUST00000104490 131 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm15313-201ENSMUST00000119179 282 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm15162-201ENSMUST00000119325 283 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm12512-201ENSMUST00000119620 217 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm13581-201ENSMUST00000120675 278 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm23753-201ENSMUST00000157575 149 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm25654-201ENSMUST00000158467 88 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Mir6410-201ENSMUST00000184204 104 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm6802-202ENSMUST00000186566 126 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm38332-201ENSMUST00000194189 147 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm44032-201ENSMUST00000204841 166 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm45002-201ENSMUST00000208045 120 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm46998-201ENSMUST00000221444 330 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm23731-201ENSMUST00000083749 107 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm25257-201ENSMUST00000083907 110 ntBASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Pcdh1F7BJK1 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 115.1 ms